Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11133 ATGGATTACCCAACACTTACGCTACTCATAACCATCTTGTGGACAATCATTTTTTTCTTCATCTCTAGCCATGGCAACAAAAGATCCAATTTTTCCAAGCTTCCACCAGGTCCTCGCCCCTATCCTATCATTGGAAACATCTTGGAGCTTCTTAGCAGCAACCCTTTAGAAGCATTCACTCAACTTTCCAAAACTTATGGACCTATAATGACTGTCAAGTTAGGCAGCACAACCACCATAGTGATTTCTTCACCACAAATTGCCAAAGAAGTACTTCATACAAATGACATAGTCTTTTCCAACAGGACAGTCCCTGATGCTGCCCGCACACTTGGCCATGACAAAGTTTCAGTGGTGTGGATGCCCACATCAGCTAAATGGAGGGCCCTTAGAAGAGTTTGTGCCACAAAAATATTCTCCACTCAACAGCTAGATTCTACACAATTCCACCGCAAGAGAAAGATGCAAGACTTGCTTAATTATGTTCATGAACGCTGCCATAAAGGTGAAGCCTTTGACTTTGGTGAGGCTATTCTTGCAACAGTCATGAATTCCATATCAGAAACTTTAATCTCTATGGATCTGTTTCATTATTATGCTGATAACAAGTCCAGGGAGTTTAAGGAAATGGTATTTGGCATCATGGAAGAAGTTGGAAGGCCTAATCTTGTGGACTTTTTCCCTTTCTTCAAATTGTTTGACCCACAGGGTGTGAGGGCAAGGATGACAAATCACTTTGGAAAGTTGCTTGCATTTTTTGATGGTGTTATGGAAGAAAGAATGACTTCAAGAGCTACAGAGTCAAAGGAATGCAATGATGTGTTAGATTCCTTTCTGGATCTTCTCAAAGAAGAGAGTTCTCAATTGAGCCGTCATGATGTTTTACATTTATTTACTGTGGATTTATTTGCTGCTGGAATAGACACGACATCTACCACAGTGGAATGGGCAATGGCAGAGTTGCTGCATAACCCAAGAAAATTGGCAAGGGTTAGAGAGGAAATTCAGCAAACACATGGCAAATTTGGACTAATTGAAGAGTCTGAGGCCTCAAAGTTACCTTACCTACGTGCTGTGGTGAAAGAAACTTTGCGCCTTCATCCACCAGTTCCATTTCTAGTACCTCACCAGTCAAAGGATGATGGGGAGTTAGCTGGCTTCATAGTTCCCAAAAATGCACAAATTTTAGTAAATGTTTGGTCAATTGGACGAGATCCAAGCTTTTGGGCTAACCCAAATTCATTTGAACCTGAAAGGTTTTTGGACAGTGAAATTGATTATAAAGGCAGGGATTTTGAACTTGTCCCATTTGGTGCTGGTAGAAGAATTTGCCCTGGATTACCCTTGGCTTCAAGGTCCATTCACTACATATTGGCCTCTCTTTTGCATCACTTTGATTGGAAGCTCGCTGATGAGCAAAAACCTGAAGATATGGACATGAGGCATATGTATGGAGTCACATTACATAAAGCTCAACCACTCCGAGTTGTGCCTATCAAAGTTTAG 1506 0.413 MDYPTLTLLITILWTIIFFFISSHGNKRSNFSKLPPGPRPYPIIGNILELLSSNPLEAFTQLSKTYGPIMTVKLGSTTTIVISSPQIAKEVLHTNDIVFSNRTVPDAARTLGHDKVSVVWMPTSAKWRALRRVCATKIFSTQQLDSTQFHRKRKMQDLLNYVHERCHKGEAFDFGEAILATVMNSISETLISMDLFHYYADNKSREFKEMVFGIMEEVGRPNLVDFFPFFKLFDPQGVRARMTNHFGKLLAFFDGVMEERMTSRATESKECNDVLDSFLDLLKEESSQLSRHDVLHLFTVDLFAAGIDTTSTTVEWAMAELLHNPRKLARVREEIQQTHGKFGLIEESEASKLPYLRAVVKETLRLHPPVPFLVPHQSKDDGELAGFIVPKNAQILVNVWSIGRDPSFWANPNSFEPERFLDSEIDYKGRDFELVPFGAGRRICPGLPLASRSIHYILASLLHHFDWKLADEQKPEDMDMRHMYGVTLHKAQPLRVVPIKV. 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11133 501 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 9 500 - -
Seca4g11133 501 SUPERFAMILY Cytochrome P450 35 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11133 501 FunFam Cytochrome P450 76C4 26 497 - -
Seca4g11133 501 Pfam Cytochrome P450 35 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11133 501 CDD CYP76-like 63 498 - -
Seca4g11133 501 Gene3D Cytochrome P450 20 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11133 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Seca4g11133 501 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11133 501 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11133 501 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11133 501 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11133 501 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11133 501 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11133 501 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11133 501 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11133 501 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11133 501 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11133 501 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11133 501 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11133 Seca-Chr4 249687876 249689954 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11133 19 500 Cytochrome P450 AT2G45550 45.714 2.32e-159 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11133 - - gmx:100809483 653.284