Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11063 ATGGCACAACATCTCAATCTCACATCACTAGTAATTTTCCTCCCTCTCCTCTTTTCAATTCTTTCCCCTGTTGAGTCATCCTTGGCTAGGCACAATTCCCACAATTCCCAATCAATGACCTACATAGAGTCCTCTTGCAATGGAACCCTCTACCCTGATCTTTGTATCCGTTGCCTTGCCAAATTTTCCAAATCCACCATAGATGGGCCTCAGCACTTAGCCCATGTTGCCTTGTCAGTGAGCCTCTCTAGAGCACTCCACACAAAAGGGTACTTATTGAAAGTGGCCAATGAACTCAGGGCAATCAACAAAGAGTACCCAAAAGTGCAAGATTGTGCAAATCTAATCACTGATAGTGTGGACCAACTTAGCCAAGCCATCAAAGAACTAAAAAGGTTGAACCAATTTAGCTCCACCATCAATGATAAAGTGTTGTGGCACATAAGTAATGTTGATACATGGGTCAGCACTGCCTTAACAGATGCTAGCAGTTGTGCAAGATCATTCCCTGGTCATAGGATGAGTAAGAGGGTAGCTACTATTAAGGTTAAGGCTTTGAATGTGGCAGAAGTCACTAGTAATGCACTAGCTTTGTTCCATAGATATGCATTAAGGTACCAGCAAGCAGCAGCTAAAAAGCCCTGA 645 0.4326 MAQHLNLTSLVIFLPLLFSILSPVESSLARHNSHNSQSMTYIESSCNGTLYPDLCIRCLAKFSKSTIDGPQHLAHVALSVSLSRALHTKGYLLKVANELRAINKEYPKVQDCANLITDSVDQLSQAIKELKRLNQFSSTINDKVLWHISNVDTWVSTALTDASSCARSFPGHRMSKRVATIKVKALNVAEVTSNALALFHRYALRYQQAAAKKP. 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11063 214 CDD PMEI-like_3 44 203 - -
Seca4g11063 214 FunFam Pectinesterase inhibitor 3 37 203 - -
Seca4g11063 214 Coils Coil 113 133 - -
Seca4g11063 214 PANTHER PECTINESTERASE INHIBITOR-LIKE 14 198 - -
Seca4g11063 214 NCBIfam pectinesterase inhibitor domain 10 202 IPR006501 GO:0004857
Seca4g11063 214 Pfam Plant invertase/pectin methylesterase inhibitor 41 198 IPR006501 GO:0004857
Seca4g11063 214 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 202 IPR035513 -
Seca4g11063 214 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 201 IPR035513 -
Seca4g11063 214 SMART PMEI_2 37 198 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11063 Seca-Chr4 248925779 248926423 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11063 42 199 Carbohydrate Esterase AT5G53370 27.879 3.02e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11063 - - gmx:100791798 300.056