Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11039 ATGGTGTCACCACTTGTACTTGTTTTTTGCCTAACTCTTCCTTTGGTTCTATTGTTCTTCTTCAAGAAACATAGAACCATTACCAACACAGCACCCTATCCACCTGGTCCTAGAGGCCTTCCCATAATTGGGAATCTTCATCAGCTGGACAATTCTATTCTCTATTTGCAGCTATGGCAACTCTCAAAAATATATGGGCCTTTATTCTCACTTCAACTTGGTCAAAGGAAAGCTATTGTTGTTTCTTCAGCTAAAATTGCCAAAGAGGTACTTAAAAACAATGACCTTGTGTTTTCTAATCGACCTATGTTACTTGCCCAACAGAAATTGTCCTATAATGGGTCTGAGATGATATTTTCCCCATACAATGATTGTTGGAGAGAAATTAGAAAAATTTGCCTTGTTCATGTCCTAAGCTCCAAGCGTGTCCCCTGTTTTTCCTCTATAAGAAAGTTTGAGGTCCAGCAAATGATCAAAAAGATATCTGGCCATGCTGATTCTTCAGTTGTTACAAACTTGAGTGAGTTATTGATTTCACTCTCAAGTACTATAATATGTAGGATTGCTTTTGGGAGAAAGTATGAAGATGAAGGAACTGAAAGGAGTAAGTTCCACAGGATGCTTAATGAGTTTCAAGCCATGATGACTGCGTTTTTTGTGTCAGACTATATTCCATTCATGGGTTGGATTGATAAACTCATAGGATTGCATGCACGTCTCGAAAGAAATTTCAAGGAGTCGGATAAGTTCTACCAAGATGTCATTGATGAACACATGGGTTCCAATTATGGAAACCAGACTGATGAAGAGGTTATAGTTGATGTCTTACTTCAATTGAAGAAACAACGTTCATTTTCAATTGATCTCACTTTTGATCACATCAAAGGTGTCCTCATGGACATGCTTGTAGCTGCAACAGATACCGTTTCAGCCACATCAGTTTGGGTCATGACTGCCCTAAGTAAAAACCCAAGAGTAATGAAGAAAGTTCAAGCAGAAATTCGGAACCTAGGAGGTAAAAAAGACTTTTTAGATGAAGATGATATTCAAAGGTTTCCTTATTTCAAAGCAGTCATAAAAGAGACATTGAGATTGTACCTACCAGCCCCATTACTTGCACCAAGAGAATCAAATGAAAATTGCACAATAAGTGGCTACCAAATTCCTGCGAAGACAATATTGTATGTGAATGCTTGGGCTATTCAAAGAGACCCTAAGGTTTGGAAAGATCCAGAGGAGTTCTATCCTGAAAGATTCTTAAACAGTGCTATAAATTTTCAGGGACAAGATTTTGAGCTTATTCCTTTTGGATCAGGCCGTAGAATTTGCCCGGGTATACCTATGGCGGTTGCATCATTAGAACTTATCCTTGCTAATCTTCTTCATTCCTTTGATTGGGAACTTCCACAAGGGTTGGTAAAAGAAGACATTGATACTGAAGTGTTGCCTGGACTTACTCAACACAAGAAGAATCCTCTTTGCCTTTCTGCCAAGATCCCTATCGCGACAATAATGGTGTCACCACTTGTACTTGTTCTTTGCCTAACTCTTCCTTTGGTTCTATTGTTCTTCTTCAAGAAACATAGAACCATTACCAACACAGCACCCTATCCACCTGGTCCTAGAGGCCTTCCCATAATTGGGAATCTTCATCAGCTGGACAATTCTATTCTCTATTTGCAGCTATGGCAACTCTCAAAATTATATGGGCCTTTATTCTCACTTCAACTTGGTCAAAGGAAAGCTATTGTTGTTTCTTCAGCTAAAATTGCCAAAGAGGTACTTAAAAACAATGATCTTGTGTTTTCTAATCGACCTATGTTACTTGCCCAACAGAAATTGTCCTATAATGGGTCTGAGATGATATTTTCCCCATACAATGATTGTTGGAGAGAAATTAGAAAAATTTGTCTTGTTCATGTCCTAAGCTCCAAGCGTGTCCCCTGTTTTTCCTCTATAAGAAAGTTTGAGGTCAAGCAAATGATCAAAAAGATATCTGGCCATGCTGATTCTTCAGTTGTTACAAACTTGAGTGAGTTATTGATTTCACTCTTAAGTACTATAATATGTAGGATTGCTTTTGGGAAAAAGTATGAAGATGAAGGAACTGAAAGGAGTAAGTTCCATGGGATGCTTAATGAGTTTCAAGCCATGATGACTGCCTTCTTTGTTTCAGACTATATTCCATTCATGGGTTGGATTGATAAACTCATAGGATTGCATGCACGTCTCGAACGAAATTTCAAGGAGTTGGATAAGTTCTACCAAGAGGTCATTGATGAACACATGGATCCCAATTATAGGAACCAAACAGAGGAAGAGGTTATAGTTGATGTCTTACTTCGATTGAAGGAACAAGGTTCATTTTCAATTGATCTCACTTTTGATCACATCAAAGGTGTCCTCATGGTATGTTTTTTTTAA 2424 0.382 MVSPLVLVFCLTLPLVLLFFFKKHRTITNTAPYPPGPRGLPIIGNLHQLDNSILYLQLWQLSKIYGPLFSLQLGQRKAIVVSSAKIAKEVLKNNDLVFSNRPMLLAQQKLSYNGSEMIFSPYNDCWREIRKICLVHVLSSKRVPCFSSIRKFEVQQMIKKISGHADSSVVTNLSELLISLSSTIICRIAFGRKYEDEGTERSKFHRMLNEFQAMMTAFFVSDYIPFMGWIDKLIGLHARLERNFKESDKFYQDVIDEHMGSNYGNQTDEEVIVDVLLQLKKQRSFSIDLTFDHIKGVLMDMLVAATDTVSATSVWVMTALSKNPRVMKKVQAEIRNLGGKKDFLDEDDIQRFPYFKAVIKETLRLYLPAPLLAPRESNENCTISGYQIPAKTILYVNAWAIQRDPKVWKDPEEFYPERFLNSAINFQGQDFELIPFGSGRRICPGIPMAVASLELILANLLHSFDWELPQGLVKEDIDTEVLPGLTQHKKNPLCLSAKIPIATIMVSPLVLVLCLTLPLVLLFFFKKHRTITNTAPYPPGPRGLPIIGNLHQLDNSILYLQLWQLSKLYGPLFSLQLGQRKAIVVSSAKIAKEVLKNNDLVFSNRPMLLAQQKLSYNGSEMIFSPYNDCWREIRKICLVHVLSSKRVPCFSSIRKFEVKQMIKKISGHADSSVVTNLSELLISLLSTIICRIAFGKKYEDEGTERSKFHGMLNEFQAMMTAFFVSDYIPFMGWIDKLIGLHARLERNFKELDKFYQEVIDEHMDPNYRNQTEEEVIVDVLLRLKEQGSFSIDLTFDHIKGVLMVCFF. 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11039 807 CDD CYP71-like 65 493 - -
Seca4g11039 807 FunFam Cytochrome P450 83B1 19 496 - -
Seca4g11039 807 SUPERFAMILY Cytochrome P450 34 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11039 807 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11039 807 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11039 807 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11039 807 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11039 807 Pfam Cytochrome P450 34 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11039 807 Pfam Cytochrome P450 538 807 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11039 807 Coils Coil 327 347 - -
Seca4g11039 807 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11039 807 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11039 807 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11039 807 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11039 807 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11039 807 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11039 807 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11039 807 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11039 807 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11039 807 Gene3D Cytochrome P450 531 807 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11039 807 Gene3D Cytochrome P450 27 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11039 807 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Seca4g11039 807 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 8 498 - -
Seca4g11039 807 SUPERFAMILY Cytochrome P450 537 807 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11039 Seca-Chr4 248350823 248361851 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11039 509 803 Cytochrome P450 AT4G31500 42.712 1.02e-77 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11039 - - gmx:100801312 734.561