Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11038 ATGATATCTCCACTTGTACTTATTCTATGCCTAACTCTTCTATTGTGCTTCTTCAAAAAACGTAGAACCATTAACCACACAGTACCCTATCCACCTGGTCCTAGAGGCTTTCCCATAATTGGGAATCTTCATCAGCTAGACAATTCCATTCTTTATCGGCAACTATGGCAACTCTCAAAAATATATGGGCCTCTGTTTTCGCTTCAACTTGGTTTAAGGCCAGCCATTGTTGTTTCTTCCTCTGACATTGCCAAAGAGGTACTAAAAAACAATGACCTTGTGTTTTCTGATCGACCTCATTTCTTTGGCCAACAGAAATTGTCCTATAATGGATCAGAGATTATATTTTCCCCATATAATGATTGTTGGAGAGAAATCAGAAAAATTTGTGTTGTCCACATCTTTAGCTCTAAGCGTGTCTCAAACTTTTCCTCTGTAAGAAAGTTTGAGATACAACAAATGATCAAAAAGATATCCAACCATGCTGCTTCTTCAGTTGTTACAAACTTGAGTGAGTTATTGATGTCTCTCTCAAGCACTATAATATGTAGGATTGCTTTTGGAAGAAGGTATGAGGATGAAGGGACTGAGAGGAGTAGGTTCCATGGAATGCTAAATGAGTTTCAAGCCATGATGACTGCCTTCTTTGTTTCTGATTATATTCCATTCATGGGTTGGATTGATAAACTCACAGGATTGCATGCACGTCTTGAAAGAAATTTCAAGGAGTTGGATAAGTTCTACCAAGATGTCATTGATGATCACATGGATCCAAGTTATAGAAACCAAACAGAGGAAGAGGTGATAGTTGATGTCTTGCTTCAACTAAAGAAACATCGTTCATTTTCAATTGATCTCACTTTTGATCACATCAAAGGTGTCCTCATGGTATGTTGTAATTCTTTTCTCTCCTTTAATTTTCATTTAACACCTTTTATCAATTATTTGTGCTGCAGATCAATTTACTACTTCATGCAAAAATGTTCTCTTGATTTACCAAAAAAAAATGTTCTCTTGTACCCAATGATTATATACTTTTGA 1041 0.3622 MISPLVLILCLTLLLCFFKKRRTINHTVPYPPGPRGFPIIGNLHQLDNSILYRQLWQLSKIYGPLFSLQLGLRPAIVVSSSDIAKEVLKNNDLVFSDRPHFFGQQKLSYNGSEIIFSPYNDCWREIRKICVVHIFSSKRVSNFSSVRKFEIQQMIKKISNHAASSVVTNLSELLMSLSSTIICRIAFGRRYEDEGTERSRFHGMLNEFQAMMTAFFVSDYIPFMGWIDKLTGLHARLERNFKELDKFYQDVIDDHMDPSYRNQTEEEVIVDVLLQLKKHRSFSIDLTFDHIKGVLMVCCNSFLSFNFHLTPFINYLCCRSIYYFMQKCSLDLPKKNVLLYPMIIYF. 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11038 346 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11038 346 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11038 346 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11038 346 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 7 296 - -
Seca4g11038 346 Pfam Cytochrome P450 31 294 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11038 346 Gene3D Cytochrome P450 24 299 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11038 346 SUPERFAMILY Cytochrome P450 29 296 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11038 Seca-Chr4 248342376 248343416 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11038 5 296 Cytochrome P450 AT4G31500 43.836 5.92e-85 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11038 - - lja:Lj3g3v1475690.1 440.269