Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11014 ATGATCTCTCTCTCCAACAACAATTGTGGAGATCGCTACATCCTTCCCCAAGAAACCAAACAGGAGAAGGGCGTAACTACACCCTCCAACTCCAAGGGACGAAAGGGGAGACCACCTGGGTCTAAGAACAAGCTTAAACCACTCATCCTAATCAAGAAGGACAACGATCATAATCTCAAACCAATTATTATTGAAATCCCTATACTAGAAATGATGTTGTTAAGAACCTACAAAATTATATCTCTTGTTGGCACTTATATGAGTGGTCATTTTTCCCCGCTCTACCCTTCCAACCATGCCTCTTCCTCCTTTGTCATTCGCCTCTCAGAGCCCTTATGCCAGGTACTTGGTGGAGTGCTTGGAGGGAAGGTTGTAGCTGCATATAGTTTGGTTGTCGTTGCCTCAATTTTCAAGAAGCTTGAGTAG 426 0.439 MISLSNNNCGDRYILPQETKQEKGVTTPSNSKGRKGRPPGSKNKLKPLILIKKDNDHNLKPIIIEIPILEMMLLRTYKIISLVGTYMSGHFSPLYPSNHASSSFVIRLSEPLCQVLGGVLGGKVVAAYSLVVVASIFKKLE. 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11014 141 MobiDBLite consensus disorder prediction 1 46 - -
Seca4g11014 141 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 22 67 IPR014476 GO:0003680
Seca4g11014 141 MobiDBLite consensus disorder prediction 1 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11014 Seca-Chr4 248073681 248074235 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11014 35 137 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 27.083 6.02e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11014 - - psat:127121089 56.9954