Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11011 ATGAAGGCCATGCCCTTGCCTTTTCAGGAATTTCAAGGGCAGGGAGTGTTGGATTTCTCTTCTCCCTCAGATTCATTTTCACTGCTTTTGCATCAACCACAAAAGTGGACCAGAGACAAAGAGGATTGCTATGTGGGCACTGAGCCTACCTCTGTTCTTGACTCCAGAAGAAGCCCAAACCATTCTACTTCCTCATCCACTATGCCCTCCTCCCTTGGCAGCAACACCACCAGCAAGGGTGGTGGTTCCACCACCGGTGCAACCCCAACCGTCTCTCAGAACCCTCCTCGGGAAGCCAGCACAGAAAAATGTGGTATGCGAATGGAGGACTGGGATGGTCAAGATCAATCTATTTTCAGGTTAATCATGAGTGATTTTGAAGACCCATCTGCAGGATTGAGCAAGCTCTTCCAGACCAGTGGCTGCGGGTCTCAAAGTGTTGATTTTAACGGAGGTTTTGGTGTTGTGGATCAAGGGTTGAACATGGTAAGTATTATTGACCCTTCTGTGCCAGGGAATTACCCTGGTTTCCCGTTCATTGCTGAAAATATAGATGGTCACAATGCAAAGACTGGTACTGTCTCCGTTGCAGAATCATTTTTTTCTGCTTCTGGTAACAATCCTCTGCTGTCATCATCTCCGGGTATATATAATTCTCAGCAGCAGCAAGGGATTGGAGAAGTAGATGAGAAACCTCAAGTTATCAATCCCCAGTTTCTGTTAAACCAGAACCAAATTCAATTCTCAGAGAACCCTGCTTTCTTTGTGCCATTAGCATACCCCCAAATGCAAGAGCAGCAAGTTTTCTCTCAGCATCAAGCTAAACGCCCTCTCCTTGACACAATTGGCCAAAACTATCAGGTCCCAAGGTTACCACTTTTGGATTCAGGGCAAGAGGTATTTGCTAGGAGGCAACAAACACAGCTTCCATTGTTTCCTCATCATGTGCAACAACAGCAACCATTGATTATGCCATCTGCAAAGCAGCAGAAGGTGTGTCCTACCGGAGACGATGCAAGCCACCAGCTTCAGCAGAGTATATTTGATCAGCTGTACAAGGCTGCTGAGATGATAGAAGCTGGTAATCCGGTTCATGCGCAAGGGATATTGGCGCGGCTCAATCAGCTCTCCCCAATTGGTAAGCCTTTCCAGAGGGCTGCTTTTTACATGAAGGAGGCCTTGCAATCAATGCTTCATTCAAACATTCACAACTTCTTGGCTTTCTCACCCATTAGTTTCATATTCAAAATTGGTGCTTATAAGTCTTTTTCAGAGATATCACCTGTTCTTCAGTTTGCCAACTTTACCTGTAATCAAGCCTTGATTGAAGCTTTGGAAAGATTTGATCGAATTCACATTATTGATTTTGATATTGGGTTTGGAGTGCAGTGGTCATCTTTTATGCAAGAGCTTGCAATGAGGAATAATGGTGTGCCTTCACTTAAAGTCACTGCTGTTGTATCACCCTCCACTTGTGATGAGTTTGAGCTCAATGTTACCCAAGAAAACTTGAATCAATATGCAAGGGACATCAACATGTCATTTGAGCTCAATGTTATTAGCATTGAATCATTGAACACTCCTTCTTGTCCGCTATCTGATCAGTTCTTTGATAATGAGGCAATTGGTGTGAATATGCCACTTTCTTGTTTTGCAAATCATCCATCATTGTTTCCTTCAGCACTTAGATTTGTAAAGCAGCTTAGGCCAAAAGTGGTGGTTACTCAGGATAGAAATTGTGATCGAATTGACCTACCATTTTCCACCAATATAGTCCATGCTCTTCAATGTTACTCAGCCTTACTTGAGTCACTTGATGCTGTAAATGTGAATCTTGATGTCCTCCAAAAGATTGAGAGGCATTTTGTCCTTCCATCCATAAAGAAAATCATACTGGGTCACCAACATTCACAGGAGAAATTGTCTCCTTGGAGGAACATGTTTCTTCAATATGGGTTCTCTCCATTCACATTTAGTAACTTCACAGAAGCTCAAGCTGAGTGTTTAGTGCAGAGAGCACCTGTACGAGGATTTCAACTGGATAGAAAACACTCCTCTCTTGTTCTATGCTGGCAGCGGAAAGAACTTGTCTCAGTTTCAACTTGGAGGTGCTGA 2115 0.435 MKAMPLPFQEFQGQGVLDFSSPSDSFSLLLHQPQKWTRDKEDCYVGTEPTSVLDSRRSPNHSTSSSTMPSSLGSNTTSKGGGSTTGATPTVSQNPPREASTEKCGMRMEDWDGQDQSIFRLIMSDFEDPSAGLSKLFQTSGCGSQSVDFNGGFGVVDQGLNMVSIIDPSVPGNYPGFPFIAENIDGHNAKTGTVSVAESFFSASGNNPLLSSSPGIYNSQQQQGIGEVDEKPQVINPQFLLNQNQIQFSENPAFFVPLAYPQMQEQQVFSQHQAKRPLLDTIGQNYQVPRLPLLDSGQEVFARRQQTQLPLFPHHVQQQQPLIMPSAKQQKVCPTGDDASHQLQQSIFDQLYKAAEMIEAGNPVHAQGILARLNQLSPIGKPFQRAAFYMKEALQSMLHSNIHNFLAFSPISFIFKIGAYKSFSEISPVLQFANFTCNQALIEALERFDRIHIIDFDIGFGVQWSSFMQELAMRNNGVPSLKVTAVVSPSTCDEFELNVTQENLNQYARDINMSFELNVISIESLNTPSCPLSDQFFDNEAIGVNMPLSCFANHPSLFPSALRFVKQLRPKVVVTQDRNCDRIDLPFSTNIVHALQCYSALLESLDAVNVNLDVLQKIERHFVLPSIKKIILGHQHSQEKLSPWRNMFLQYGFSPFTFSNFTEAQAECLVQRAPVRGFQLDRKHSSLVLCWQRKELVSVSTWRC. 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11011 704 ProSiteProfiles GRAS family profile. 338 703 IPR005202 -
Seca4g11011 704 MobiDBLite consensus disorder prediction 51 99 - -
Seca4g11011 704 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 306 699 IPR005202 -
Seca4g11011 704 Pfam GRAS domain family 349 703 IPR005202 -
Seca4g11011 704 MobiDBLite consensus disorder prediction 48 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11011 Seca-Chr4 248052696 248054810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11011 325 704 GRAS Transcription Factor Family AT4G00150 53.906 2.03e-131 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Seca4g11011 GRAS 6.3e-90 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11011 - - gmx:100801785 1034.63