Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10940 ATGAATAAGCTCCACACAACACATTCTTGGGATTTTCTTGGATTAGACTCAGCCTACAAGAGTGACAATGCTGCTCCGGACTCCGCATCCAATGTCATTGTTGGTGTCATTGACTCTGGGGTGTGGCCTGAATCAGAAAGCTTCATTGATTATGGATTAGGTCCTGTGCCCGAGAAATTCAAAGGAGAGTGTGTTACTGGTGATAATTTTACACTAGCCAATTGCAACAAGAAAATTATTGGTGCTCGGTTCTGTTCAAAAGGGTTTGGAGCAGAAAGAGATAATGATGGACATGGAACACACACTGCTTCTACGATTGCAGGATCCATTGTTGCTAATGCCAGCTTACCCTTGAGATGA 360 0.4333 MNKLHTTHSWDFLGLDSAYKSDNAAPDSASNVIVGVIDSGVWPESESFIDYGLGPVPEKFKGECVTGDNFTLANCNKKIIGARFCSKGFGAERDNDGHGTHTASTIAGSIVANASLPLR. 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10940 119 SUPERFAMILY Subtilisin-like 4 112 IPR036852 GO:0004252|GO:0006508
Seca4g10940 119 ProSiteProfiles Serine proteases, subtilase domain profile. 9 119 - -
Seca4g10940 119 Pfam Subtilase family 30 110 IPR000209 GO:0006508|GO:0008236
Seca4g10940 119 PRINTS Subtilisin serine protease family (S8) signature 29 48 IPR015500 -
Seca4g10940 119 PRINTS Subtilisin serine protease family (S8) signature 94 107 IPR015500 -
Seca4g10940 119 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 116 IPR045051 -
Seca4g10940 119 Gene3D Peptidase S8/S53 domain 31 116 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10940 Seca-Chr4 247095837 247096484 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10940 3 115 Subtilisin-like Serine Gene Family AT1G20160 50.000 4.71e-35 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10940 - - gmx:106794255 191.815