LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca4g10921	ATGGCCTCGCACGGGTATCTCTCTGTTTTCTTCCATGCCTTTGTGATTGCATCTCTTGCAACCACAGGTTTCTCACAACTGTCAGCTAATTACTATGACTACACGTGTCCTAACGCTTTGAGCACCATTAAAAGTGTCGTGGAGGGTGCAGTGTGGAAAGAGCGCCGTATGGGCGCGTCTTTGCTACGATTGCACTTCCATGATTGCTTTGTTAATGGTTGTGATGGTTCAATACTTCTAGATCCCACATCATCCATTGACAGTGAAAAAAATGCAGGGCCCAATTTCCAATCTGCTAGAGGATTTGAAGTGGTGGATGATATCAAGAAGGCAGTAGACGCAGCATGTGGAAAACCAGTTGTTTCTTGCGCTGACATTTTGGCCGTTGCCGCTCGCGACTCTGTAGTTGCGTTAGGGGGACCAACATGGGAGGTGCAATTGGGGAGAAGAGACTCGACGACAGCAAGCCGTGATGCTGCAAATAAAGACATTCCAGCACCATTTTTCAGCCTCTCTCAACTTATTGAGAATTTCAAGAACAAAGGTCTAGATGAGAAGGATCTGGTGGTTCTTTCTGGAGGACACACGATTGGATATGCACGTTGTGCTACGTTTAGGGACCGTATCTACAAGGACACTGACATCAATTCCGAGTTTGCACAACAGCTTAAGTACATCTGTCCCATAAATGGAGGTGACTCAAACCTTTCTCCTTTGGACCCAACAGCAGCGAACTTTGACGTAGCTTACTACTCTAATTTACTTCAAACCAAAGGGCTTCTTCACTCTGATCAGGAACTCTTCAACGGTGGTTCCACAGATGCACTTGTTAAACAGTACAGCTACTATCCCGAAGCTTTCTTCCAAGACTTCGCCGAATCGATGATTAAGATGGGAAATATTCAGCCCCTCACTGGGGATCAAGGTGAAATACGTGTTGACTGCAAACATAGAATGGCCTCGCATGTGTATTTTTCTGTTGTCCTCTATGGTTTTGTGTTTGCATCTCTTGCAACCACAGGTATCTCACAATTGTCACCTAATTACTATGATTACACGTGTCCTAATGCTCTGAGCACCATTAAAAGAGTCGTGGAGAGTGCCGTGTGGAAAGAGCCCCGAATGGGTGCTTCTTTGCTACGATTGCACTTCCATGATTGCTTTGTTAATGGTTGTGACGGTTCACTCCTTCTAGATTCTACATCCTCCATTGACAGTGAAAAGTTGTCAAATGCTAATAAACAGTCAGCTAGAGGTTTTGAAGTGGTGGATGAGATCAAGAAGGCCGTGGATGAAGCATGTGGAAAACCAGTTGTTTCTTGCGCTGACATCTTAGCCGTTGCCGCACGAGACTCTGTAGTTGCCTTAGGGGGGCCAACATGGAAAGTGAGAGTGGGGAGAAGAGACTCGACCACAGCAAGCCGTGCTGCTGCAGATGCTAACATTCCAGCACCATTTTTCAGCTTTTCTCAACTTATTGACAACTTCAAGAGCCATGGTCTAGATGAGAAGGACCTGGTGGTTCTTTCTGGAGCCCACAGCATTGGATATGCACGTTGTGTTACGTTTAGGGACCGTATCTACAATGACTCTAACATCAATTCCCACTTTGCACAACAACTTAAGTACATTTGCCCCAGAAATGGAGGTGACTCCAACCTTGCTCCTTTGGACCCCACAGCCGCGCGCTTTGACGCAGCCTACTACTCTAATTTAATGAAAGAGAGAGGACTTCTTCACTCTGATCAGGAACTCTACAGTGATGATTCTACAAATGGACTTGTTAAAGAGTACAGCGACGATACCCAAGATTTCTATCAGGACTTCGCCAACTCCATGATTAAGATGGGAAATATGCAGCCCCTCACTGGGAATCAAGGTGAAATACGTGTTAACTGCAGGAGAGTCAACTACTAA	1917	0.4564	MASHGYLSVFFHAFVIASLATTGFSQLSANYYDYTCPNALSTIKSVVEGAVWKERRMGASLLRLHFHDCFVNGCDGSILLDPTSSIDSEKNAGPNFQSARGFEVVDDIKKAVDAACGKPVVSCADILAVAARDSVVALGGPTWEVQLGRRDSTTASRDAANKDIPAPFFSLSQLIENFKNKGLDEKDLVVLSGGHTIGYARCATFRDRIYKDTDINSEFAQQLKYICPINGGDSNLSPLDPTAANFDVAYYSNLLQTKGLLHSDQELFNGGSTDALVKQYSYYPEAFFQDFAESMIKMGNIQPLTGDQGEIRVDCKHRMASHVYFSVVLYGFVFASLATTGISQLSPNYYDYTCPNALSTIKRVVESAVWKEPRMGASLLRLHFHDCFVNGCDGSLLLDSTSSIDSEKLSNANKQSARGFEVVDEIKKAVDEACGKPVVSCADILAVAARDSVVALGGPTWKVRVGRRDSTTASRAAADANIPAPFFSFSQLIDNFKSHGLDEKDLVVLSGAHSIGYARCVTFRDRIYNDSNINSHFAQQLKYICPRNGGDSNLAPLDPTAARFDAAYYSNLMKERGLLHSDQELYSDDSTNGLVKEYSDDTQDFYQDFANSMIKMGNMQPLTGNQGEIRVNCRRVNY.	639

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca4g10921	638	FunFam	Peroxidase	483	616	-	-
	Seca4g10921	638	PRINTS	Haem peroxidase superfamily signature	187	202	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Seca4g10921	638	PRINTS	Haem peroxidase superfamily signature	121	138	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Seca4g10921	638	PRINTS	Haem peroxidase superfamily signature	139	151	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Seca4g10921	638	PRINTS	Haem peroxidase superfamily signature	58	72	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Seca4g10921	638	PRINTS	Haem peroxidase superfamily signature	557	572	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Seca4g10921	638	SUPERFAMILY	Heme-dependent peroxidases	344	637	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
	Seca4g10921	638	ProSitePatterns	Peroxidases proximal heme-ligand signature.	187	197	IPR019793	-
	Seca4g10921	638	FunFam	Peroxidase	165	298	-	-
	Seca4g10921	638	FunFam	Peroxidase	30	172	-	-

Showing 1 to 10 of 35 entries

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca4g10921	Seca-Chr4	246853807	246862493	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca4g10921	343	637	Peroxidase	AT5G05340	59.732	2.32e-122	364

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca4g10921	K00430		-	vvi:100232945	677.167

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