Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10920 ATGAATCATGTTCAGTCATTTCATAATAGAATGGCATCGCATGGATATTTCTCTGCCTTCCTCTATGCCTTTGTGTTTGCAACAACTTCTTTCTCACAACTGTCACCTAATTACTATGGCTACACCTGCCCTAATGCTCTGAGCACCATTAAAAGAGTCGTGGAGGGTGCCGTGTGGAAAGAGCCCCGAATGGGTGCTTCTTTGCTACGATTGCACTTTCATGATTGCTTTGTTAACGGTTGTGATGGTTCAATCCTTCTAGACTCTACATCCTCCTTTGACAGTGAAAAGAATGCAGGTCCTAATTTTCAGTCAGCTAGAGGATTTGAAGTGGTGGATGAGATCAAGAAGGCTGTGGACGAAGCATGTGGAAGACCAATTGTTTCTTGCGCTGACATTTTGGCTATTGCTGCTCGAGACTCTGTAGTTGCGTTAGGAGGCCCCACATGGGAAGTGCAACTAGGGAGAAGAGATTCCACAACAGCAAGCCGTGATGCTGCAAATAAAGACATTCCAACACCATTTTTCAGCCTTTCTCAACTTATCGACATCTTCAAGAGCCATGGTCTAGATGAGAAGGATCTGGTGGTTCTCTCTGGAGCCCACAGTATTGGATTTTCACGTTGTGTTACGTTTAGGGACCGTATCTACAATGACACTGACATCAATCCCTACTTTGCACGATCGCTTAGATACTTATGTCCAAGAATTGGAATGGACTCTAACCTTGCTCCTTTGGACCCAACAGCTGCCAAGTTTGACGCAGCCTACTTCTGTAATTTACTTCAAATGAAAGGGCTTTTTCACTCTGATCAGGAACTCTTCAATGGTGGTTCTACTGATGCACTTGTTAGACAGTACAGCTACGATATCGTAGCTTTCTTTCAGGAATTCGCGAACTCGATGATTAAGTTGGGAAATATTCAGCCCCTCACTCGGAATCAAGGTGAAATACGTGTTAATTGCAGGAAAGTGAACTATTAA 984 0.437 MNHVQSFHNRMASHGYFSAFLYAFVFATTSFSQLSPNYYGYTCPNALSTIKRVVEGAVWKEPRMGASLLRLHFHDCFVNGCDGSILLDSTSSFDSEKNAGPNFQSARGFEVVDEIKKAVDEACGRPIVSCADILAIAARDSVVALGGPTWEVQLGRRDSTTASRDAANKDIPTPFFSLSQLIDIFKSHGLDEKDLVVLSGAHSIGFSRCVTFRDRIYNDTDINPYFARSLRYLCPRIGMDSNLAPLDPTAAKFDAAYFCNLLQMKGLFHSDQELFNGGSTDALVRQYSYDIVAFFQEFANSMIKLGNIQPLTRNQGEIRVNCRKVNY. 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10920 327 CDD secretory_peroxidase 33 325 IPR033905 GO:0004601|GO:0042744
Seca4g10920 327 FunFam Peroxidase 172 305 - -
Seca4g10920 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 194 204 IPR019793 -
Seca4g10920 327 ProSiteProfiles Plant heme peroxidase family profile. 33 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g10920 327 Gene3D - 37 323 - -
Seca4g10920 327 PRINTS Haem peroxidase superfamily signature 65 79 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g10920 327 PRINTS Haem peroxidase superfamily signature 146 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g10920 327 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g10920 327 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g10920 327 PRINTS Haem peroxidase superfamily signature 128 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g10920 327 PANTHER PEROXIDASE 72-RELATED 31 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g10920 327 SUPERFAMILY Heme-dependent peroxidases 33 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca4g10920 327 Gene3D Peroxidase, domain 2 172 305 - -
Seca4g10920 327 FunFam Peroxidase 37 179 - -
Seca4g10920 327 ProSitePatterns Peroxidases active site signature. 65 76 IPR019794 GO:0004601
Seca4g10920 327 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g10920 327 PRINTS Plant peroxidase signature 67 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g10920 327 PRINTS Plant peroxidase signature 146 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g10920 327 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g10920 327 PRINTS Plant peroxidase signature 43 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g10920 327 PRINTS Plant peroxidase signature 107 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g10920 327 PRINTS Plant peroxidase signature 127 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g10920 327 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g10920 327 Pfam Peroxidase 52 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10920 Seca-Chr4 246841428 246842861 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10920 32 326 Peroxidase AT5G05340 60.738 1.79e-126 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10920 K00430 - gmx:100802035 497.664