LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca4g10918	ATGGCTGAAGATGGGCGTATACTCTCTCCGTCCATCCCCTTGGTGAATGACTCCTCAGAGCTCAACTCGGAGAGTTTTGATACTTTCTACAACAAATCCTCTGTAATAGGTGGTGCAAGCAGTGAATACACGATCTTCCTCTCCAACAACGACAATTATGAGGAAGTGTCAAAATCAGTCATCTTTGAAATCCCTGCTGGAAAAGACATTGTTCAGCCCATCATCGAGTATACTTGTCGTCATCGTGTTGGCATCGTAGTGCTATCTGGATCAGGTTTCGTTTCCGATGTTACACTTCTCCACCCCTTGACCCATATTGCTCTTGCTTTGTCTATCATTGGACACTTCAACATTGTATCTTTCACAGGCACTTACATGGGTGGTCATTTTCCTCCACTCTCCTCTCCCACCCCTGCTTGTTCTTCTTTTGTGATTAACCTCTCAGGCTTCCCTAGTCAAGTGTTCTGTGGACTTGTTGGAGGAAGGGTTATAGCTGCAAGTCGTGGGGTTGTTGTGGCATCAACATTCAAGAAGTTTGAGTACCACATTGTTCCTGGAATTGCTAAGGAAGTTGAAGAGGGTGACCCCACAAATGTTGCAGCCATTAATGCTAATGGCATTACCAACAACACCGACATTGCCATGACTAATAATATGTCTTCTTTCGGTATTACCAATTTAACCTCACTGAATCACCAACTCCCTATTCCATAA	714	0.4412	MAEDGRILSPSIPLVNDSSELNSESFDTFYNKSSVIGGASSEYTIFLSNNDNYEEVSKSVIFEIPAGKDIVQPIIEYTCRHRVGIVVLSGSGFVSDVTLLHPLTHIALALSIIGHFNIVSFTGTYMGGHFPPLSSPTPACSSFVINLSGFPSQVFCGLVGGRVIAASRGVVVASTFKKFEYHIVPGIAKEVEEGDPTNVAAINANGITNNTDIAMTNNMSSFGITNLTSLNHQLPIP.	238

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca4g10918	237	PANTHER	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15	55	198	IPR014476	GO:0003680
	Seca4g10918	237	SUPERFAMILY	AF0104/ALDC/Ptd012-like	58	181	-	-
	Seca4g10918	237	ProSiteProfiles	PPC domain profile profile.	54	197	IPR005175	-
	Seca4g10918	237	Pfam	Plants and Prokaryotes Conserved (PCC) domain	59	177	IPR005175	-
	Seca4g10918	237	CDD	DUF296	61	174	IPR005175	-
	Seca4g10918	237	Gene3D	-	57	210	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca4g10918	Seca-Chr4	246830602	246831315	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca4g10918	61	185	AT-hook Motif Nuclear Localized (AHL) Family	AT5G49700	36.719	1.81e-16	74.7

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca4g10918	-		-	lang:109328424	133.265