Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10791 ATGGCTAAACTAGAAAATTCAAAACCTGGGTGTTTCTCTGGCTTCTTACGCGTGCTTCTTTGTGCTGGAAATGGAACTAGTCCTCCAGTGTATCCATCTGATCATGTTGATGAAAAAGAACCAATTCATCCCAACAAAGATAAAGTGGTGTATGATACAGCTACTCCTGGAGTAGTTGCAAGGTTGATGGGGTTAGATTCACTGCCAAAAACCAACTTGGTAGTGAAAGGAGCTACCTTAGATTCGGTTCCAAGAAGTAGGTCAGTGAACTTTGTGGATTACTTGCTTGAGTTTGATCTAGGCAATGCCAACAACAACCATCGCCGTGTGAAAACCTCAGCATCGTTTCGAGAAGTACCTTCATTGGTTCAGAGGCAGAACCATGATGTTGTTGTGTTTGACATTGATTACAATGCGGCTAAAGTTCAAGAAGGTAGAGCTAATTTGAGGAAATTGGAAACGGGTTTGGGAGAGTTGAACTTGAAGCAGGGGAAGAAACAGGGGAGTAAGAAGAACAAGGAGGTTGTGAGAGAGAAGGTGAGTGTGAAGAAGGAGAGGAATCAAGGGAAGAACAAGAAGATTTCAAAGTTGAAGAATGAACCAAGAAGGGTCCCTTCTTCTAAGAATAGCTCAAAGGTTCGAAATCATGGTGAAGCTAAAGATTTTTCCCCTGTTTCTCCAAGCTCCAAGAGTTGTACTTGTAGTTATAGATATAGTGGTGCTGGTTCAAGCTCAAGCTCAAACTCAAATTCAAGCTCTCCCTTGAAAAATAGACAAAAGAAAGGGTTGGTTGAACCAAAAATCAGAAACAACATGAGAAACCAGCAGTCACCAAAGAAGATAGAGACAGAAAACAGCTTGGAAAATCTCAGTCCAGTTTCAGTTCTAGATAACAATGACTATCATTTCCTTTATGGAATTGATTTTCTAATAGATGGTACGAGCACATTAGCTTCAAAGTCAAAGTGGAAATCTTCAATGCCAGTGTCCTTGGATTATGGTATTAAAGAGGGAGGAAGCAATAATAAAGGATATGGCTACACTGACATCAACAGGGAAGCAGAGTATTACTCAGACATAATGTTGAAGCTTCGTACTTTGGCAGAAGAGGATATAATAAGAGAGTCAGATTGCACAACAGAGCGTATGTGTGAGACTGAAAGCTTTGAGGAAATTTGTTTGGTATTTGAGAACAAAATTTTGGACCTTTTATTATACGAGGTCGTCAGTGATTTGTAG 1239 0.4011 MAKLENSKPGCFSGFLRVLLCAGNGTSPPVYPSDHVDEKEPIHPNKDKVVYDTATPGVVARLMGLDSLPKTNLVVKGATLDSVPRSRSVNFVDYLLEFDLGNANNNHRRVKTSASFREVPSLVQRQNHDVVVFDIDYNAAKVQEGRANLRKLETGLGELNLKQGKKQGSKKNKEVVREKVSVKKERNQGKNKKISKLKNEPRRVPSSKNSSKVRNHGEAKDFSPVSPSSKSCTCSYRYSGAGSSSSSNSNSSSPLKNRQKKGLVEPKIRNNMRNQQSPKKIETENSLENLSPVSVLDNNDYHFLYGIDFLIDGTSTLASKSKWKSSMPVSLDYGIKEGGSNNKGYGYTDINREAEYYSDIMLKLRTLAEEDIIRESDCTTERMCETESFEEICLVFENKILDLLLYEVVSDL. 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10791 412 PANTHER OS05G0128300 PROTEIN 1 412 - -
Seca4g10791 412 MobiDBLite consensus disorder prediction 163 281 - -
Seca4g10791 412 Pfam DUF761-associated sequence motif 50 72 IPR032795 -
Seca4g10791 412 MobiDBLite consensus disorder prediction 164 219 - -
Seca4g10791 412 MobiDBLite consensus disorder prediction 222 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10791 Seca-Chr4 245175065 245177360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10791 1 412 TRM (TON1 Recruiting Motif) Superfamily AT5G01370 25.586 2.91e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10791 - - tpra:123924863 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g10791 4 245175065 245177360 Seca4g10791 4 245175065 245177360 ECH