Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10786 ATGGAAGCAGGGCATCATCACCAACACCATCTTCATCATCAGAATATCAACGTTCAGCAGCAAGATGTCACCGATAGGTTCCCTCAGTGGAGCATCCAAGAAACAAAAGAATTCCTTATGATCCGAGCAGAGCTCGATCAGACTTTCATGGAGACCAAACGCAACAAGCAATTGTGGCAAATCATCTCCAATCACATGAACCAAAAGGGTTTTCATCGAAGTGCAGAACAGTGCAAGTGCAAGTGGAAAAACCTCGTTACCCGCTATAAGGGATGTGAAACAATGGAAGAAGAAGCCATGAGACAGCAATTCCCATTTTACAATGAACTTCAAGCAATTTTCACTGCAAGGATGCAGAGAATGTTGTGGGCTGAAGCTGAAGGTGGTTCCAAGAGGAAGCTCTCATCGGATGATGAAGATGAAGAGAGTACTGAGGCTGATCAGAAGGGTGGGGGTAAGAAGAAGAAAAAGGCTAAGATAGTTAGTGGTGGAAGTAGTTTGAACAATTTGAAGGAGATTCTTGAGGAGTTTATGAGGCAACAGATGCAAATTGAAGCGCAGTGGATGGAAGCGTTTGAGGCGAGGGAGAATGAGAGGAGGTTGAAGGAGATGGAGTGGAGACAACAAATGGAAGTGTTGCAGAATGAGAGGATAATGTTGGATCAGAGATGGAGAGAAAGGGAGGAACAAAGGAGAATTAGAGAAGAAGCTAGGGCTGACAAAAGGGATGCTCTAATCACTGCTCTCCTAAACAAACTACAAAGGGACGAGATATAG 777 0.4427 MEAGHHHQHHLHHQNINVQQQDVTDRFPQWSIQETKEFLMIRAELDQTFMETKRNKQLWQIISNHMNQKGFHRSAEQCKCKWKNLVTRYKGCETMEEEAMRQQFPFYNELQAIFTARMQRMLWAEAEGGSKRKLSSDDEDEESTEADQKGGGKKKKKAKIVSGGSSLNNLKEILEEFMRQQMQIEAQWMEAFEARENERRLKEMEWRQQMEVLQNERIMLDQRWREREEQRRIREEARADKRDALITALLNKLQRDEI. 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10786 258 PANTHER FI21293P1 10 254 - -
Seca4g10786 258 FunFam Zinc finger and SCAN domain-containing 20 30 91 - -
Seca4g10786 258 CDD GT1 28 93 - -
Seca4g10786 258 Gene3D - 30 91 - -
Seca4g10786 258 SMART sant 26 88 IPR001005 -
Seca4g10786 258 Coils Coil 167 187 - -
Seca4g10786 258 Pfam Myb/SANT-like DNA-binding domain 29 113 IPR044822 -
Seca4g10786 258 ProSiteProfiles Myb-like domain profile. 30 86 IPR001005 -
Seca4g10786 258 MobiDBLite consensus disorder prediction 129 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10786 Seca-Chr4 245152172 245153617 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10786 7 256 Trihelix Transcription Factor Family AT2G38250 56.458 3.51e-73 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Seca4g10786 Myb_DNA-bind_4 1.5e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10786 - - gmx:100778195 360.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g10786 4 245152172 245153617 Seca4g10786 4 245152172 245153617 ECH