Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10723 ATGATTTGCGGAGGCAGGGAGGTGAATCGGGATGATTTGACGTGCTCACCGCCACCAGAGTCTCCATTCAACCCTAAACCCAATCATGAGACCGATTCGGAGCATCCTCCCAGTTATGAGACCGATTTGGAGAGTCTGGATCCGGATCCCAGCAGAAGTATCTACGACGTGTTCTTGAGTTTTAGAGGGGCAGACACTCGTGGATCTTTCACTTCCCATCTCTTTGCGGCTCTTCAAAATGCCGGAATTAATGTTTACAGGGACGACGATTCACTTCGGAGGGGAGATGATATTTCATCCTCACTACCGGGAGCGATCGGAGAGTCTCAAATTTCTGTTATTGTTTTCTCTAAAAATTATGCGAATTCACGGTGGTGTCTGCGAGAGTTGGAAAAAATAATGGAGTGTCACAGAACCACAGGCCAGGTGGTTCTGCCGGTGTTCTACGATGTAGATCCCTCGGAAGTACGTCATGTAACAGGTGAGTTTGGAAGAGCATTTCAAAATCTTATAAATAGAACCACAATGGATGAAGACAGGATGCTGAGTTCTTCGACGCCGCTAACACGGGAGATAGTGGAGAATTGGAAGATGGCCCTACGCGAGGCTGGTGGCATTGCAGGGTTTGTAGTCCTAAATTCCAGGAATGAAAATGAAGCTATCAAGAATGTTGTTGAAAATGTTACCCGCTTGCTTGACAAGACTGACTTGTTCATTGCTGCTAATCCAGTGGGAGTTGAATCTCGAGTGGAACATATGATTCAACTGCTAGACAACCAGCAATCAAACGATGTTGTGCTACTAGGGATATGGGGCATGGGAGGAATTGGAAAAACAACCATTGCAAAAGCCTTTTACAATAAAATTGGCCGCAATTTTGAGGGTAGGAGCTTCCTTGCAAATATTAGGGAAGTTTGGGAACAAGATGCTGGACAAGTGCGTTTACAAGGGCAACTTCTATTTGATATCTTCAAGGAAACGACAACCAAGATACATAACATTGATTCAGGAAAAAATATATTGAAGGAAAGACTCTGCCATAAAAGAGTACTTGTTGTACTTGACGATGTGAATAAATTGGACCAACTGAATGCTTTGTGTGGAAGTCATAAATGGTTTGGTTCAGGGAGTAGAATAATCATCACAACTAGAGATAAGCATATACTGACAGGGAATAGAGTTGACCGAGTATACACAATGAAAGAAATGGATGAAAGTGAATCCATTGAGCTTTTTAGTTGGCATGCATTCAAGCAAGCGAGCCCTAAAGAAGATTTTGCTGGAATTTCCAGAAATGTAGTTGAATATTCTGGGGGATTGCCACTAGCTCTTGAAGTCCTCGGGTCCTATTTGTTTGATAGGGGGATAACAGAGTGGGAGTGTGTATTGGAGAAACTCAAAAGAATTCCCAATGATCAAGTACAAAAGAAGTTAAAAATAAGCTATGATGGTTTAACTGATTATACAGAGAAAGAAATATTCCTTGACATAGCTTGTTTCTTTATTGGGATGGACCGAAATGATGTTATACATATATTAAATGGCTGTGGACTTTTTGCAGACAATGGAGTAAGAGTCCTTGTAGAAAGAAGCCTTGTAACTGTTGATGGTAAGAACAGGCTTGGAATGCATGATTTGCTTCGTGACATGGGAAGAGAAATCATTCGTGAAGAATCACCAAAGGAGCCTGAGGAGCGTAGCAGGTTATGGTTTCATAAGGATGTGGTTGATGTTTTATCAGATCAAAGTGGAACAAAAGCTGTTGAGGGACTGACTTTGAAGTTGCCAAGAACTAATACAAAATGTTTCAGTACTAATGCTTTTAAGAAGATGAAGAGACTCAGATTGCTTCAACTTTCTAGTGTACAACTTGATGGAGATTTTGAATATCTTTCACGCAATCTGAGATGGCTGTGTTGGCAAGGGTTTCCTTTAACATGCATACCTTCAAACTTTTATCAAGGAAATTTAGTTTCCATTGAGTTAGAAAACAGCAATGTCCAACTTGTATGGAAAGAGGCCCAGAGGATGGAGATGCTGAAAATTCTCAATCTCAGTCATTCTCGTTATTTGACACAGACCCCAGACTTCTCAAACATGCCTAATCTTGAAAAGCTAGTACTCACCGATTGTCCAAGCTTGTCTAAGGTTTCCCATAGCATTGGACATCTCAATAAAGTTCTTCTAATAAATTTGAAAGACTGTATTAGCCTTAGAAACCTTCCAAGAAGCATCTATAAGTTGAAATCTCTGAAAACACTCATTCTTTCTGGATGTTTAAAGATTGACAAATTGGAAGAGGACTTAGAGCAGATGGAATCTTTGACAACCCTGATTGCAGACAAGACTGCAATAACAAGAGTACCCTTTTCAATAGTAAGGTCAAAAAGCATTGGATATATTTCTTTGTGTGGTTACAAAGGATTCTCACGAGATGTGTTTCCTTCTATCATTTGGTCCTGGATGTCACCAACAAATAATCCGTTATCCCTAGTTCAAAACACTGCAGGCATGTCATCTGTTGTTTCTTTAGATGTATCAAATAGTAGTTCCCACGAACTATCATCTATTTCCAAGGACCTTCCAAATCTTCGAAGTCTTTGGGTGGAGTGCGGCTCTGAACTTCAACTTTCTCGATATGCAGCTACAATTTTGGATGCCTTATATGCCACAAATTCTAAAGAAATGGAATCAAGTGCAACCACATCATCAAAAGTATCAAATATGGAGACACCTGCATTAAGACCAAAAGGTTCCTGGAAATCTCTTCTAATTCAAATGGGACTGAATTGCCACGTTACCAATATTCTGAAAGAGAGAATTTTACAGAATACAGCTGTCAGTGAGTGTGGCCATTGTTTGCTCCCCGGTGATAATTACCCAGATTGGTTAACCTTTGATTGTGAAGATTCTTCTGTAATTTTTGAAGTTCCTCAAGTGAATGGACATAACTTGAAGACAGTGATGTGCATTATCCATTATTCTGCACCAGATCTGGATTCGGATCCGGATCCCAGCAGAAGTATCTACGACGTGTTCTTGAGTTTTAGAGGGGAAGACACCCGTGCTTCCTTCACTTCACATCTCTATGCCGCTCTTAAAAATGCCGGAATTGTTGTTTTCAGGGACGATGATTCACTTGGAAGGGGAGATGAAATTTCACCCTCACTACTGCGAGCAATCGAAGAGTCTCAAATTTCTGTTATTGTTTTCTCTAAAAATTATGCGAATTCACGGTGGAGTCTGCAAGAGTTGGAAAAAATAATGGAGTGTCACAGAACCACAGGCCAGGTGGTTCTGCCAGTGTTCTGCGGTGTAGATCCCTCGGAAGTACGTCATCTAACAGGTGAGTTTGGAAAAGGATTTCGAGATCTTATAAACAGAACTACAATGGACGAAGAGATAGTGGAGAATTGGAAGAAGGCGCTTCGTGAGGCTGGTGGCATTGCAGGGTTTGTACCCTTGAATTCCAGGAATGAAAATGAAGCTATCAAGAATGTTGTTGAAAATGTTACCCGCTTGCTTGACAAGACGGACTTGTTCATTGCTGCTAATCCAGTGGGAGTTGAATCTCGAGTGGAACATATGATTCAACTGCTAGACAACCAGCAATCAAACGATGTTGTGCTACTAGGGATATGGGGCATGGGAGGAATTGGAAAAACAACCATTGCAAAAGCCTTTTACAATAAAATTGGCCGCAATTTTGAGGGTAGGAGCTTCCTTGCAAATATTAGGGAAGTTTGGGAACAAGATGCTGGACAAGTGCGTTTACAAGGGCAACTTCTATTTGATATCTTCAAGGAAACGACAACCAAGATACATAACATTGATTCAGGAAAAAATATATTGAAGGAAAGACTCTGCCATAAAAGAGTACTTGTTGTACTTGACGATGTGAATAAATTGGACCAACTGAATGCTTTGTGTGGAAGTCATAAATGGTTTGGTTCAGGGAGTAGAATAATCATCACAACTAGAGATAAGCATATACTGACAGGGAATAGAGTTGACCGAGTATACACAATGAAAGAAATGGATGAAAGTGAATCCATTGAGCTTTTTAGTTGGCATGCATTCAAGCAAGCGAGCCCTAAAGAAGATTTTGCTGGAATTTCCAGAAATGTAGTTGAATATTCTGGGGGATTGCCACTAGCTCTTGAAGTCCTCGGGTCCTATTTGTTTGATAGGGGGATAACAGAGTGGGAGTGTGTATTGGAGAAACTCAAAAGAATTCCCAATGATCAAGTACAAAAGAAGTTAAAAATAAGCTATGATGGTTTAACTGATTATACAGAGAAAGAAATATTCCTTGACATAGCTTGTTTCTTTATTGGGATGGACCGAAATGATGTTATACATATATTAAATGGCTGTGGACTTTTTGCAGACAATGGAGTAAGAGTCCTTGTAGAAAGAAGCCTTGTAACTGTTGATGGTAAGAACAGGCTTGGAATGCATGATTTGCTTCGTGACATGGGAAGAGAAATCATTCGTGAAGAATCACCAAAGGAGCCTGAGGAGCGTAGCAGGTTATGGTTTCATAAGGATGTGGTTGATGTTTTATCAGATCAAAGTGGAACAAAAGCTGTTGAGGGACTGACTTTGAAGTTGCCAAGAACTAATACAAAATGTTTCAGTACTAATGCTTTTAAGAAGATGAAGAGACTCAGATTGCTTCAACTTTCTAGTGTACAACTTGATGGAGATTTTGAATATCTTTCACGCAATCTGAGATGGCTGTGTTGGCAAGGGTTTCCTTTAACATGCATACCTTCAAACTTTTATCAAGGAAATTTAGTTTCCATTGAGTTAGAAAACAGCAATGTCCAACTTGTATGGAAAGAGGCCCAGAGGATGGAGATGCTGAAAATTCTCAATCTCAGTCATTCTCGTTATTTGACACAGACCCCAGACTTCTCAAACATGCCTAATCTTGAAAAGCTAGTACTCACCGATTGTCCAAGCTTGTCTAAGGTTTCCCATAGCATTGGACATCTCAATAAAGTTCTTCTAATAAATTTGAAAGACTGTATTAGCCTTAGAAACCTTCCAAGAAGCATCTATAAGTTGAAATCTCTGAAAACACTCATTCTTTCTGGATGTTTAAAGATTGACAAATTGGAAGAGGACTTAGAGCAGATGGAATCTTTGACAACCCTGATTGCAGACAAGACTGCAATAACAAGAGTACCCTTTTCAATAGTAAGGTCAAAAAGCATTGGATATATTTCTTTGTGTGGTTACAAAGGATTCTCACGAGATGTGTTTCCTTCTATCATTTGGTCCTGGATGTCACCAACAAATAATCCGTTATCCCTAGTTCAAAACACTGCAGGCATGTCATCTGTTGTTTCTTTAGATGTATCAAATAGTAGTTCCCACGAACTATCATCTATTTCCAAGGACCTTCCAAATCTTCGAAGTCTTTGGGTGGAGTGCGGCTCTGAACTTCAACTTTCTCGATATGCAGCTACAATTTTGGATGCCTTATATGCCACAAATTCTAAAGAAATGGAATCAAGTGCAACCACATCATCAAAAGTATCAAATATGGAGACACCTGCATTAATTGAATGGAGCAGTCTAGCACACATTTCAGGACCAAAAGGTTCCTGGAAATCTCTTCTAATTCAAATGGGACTGAATTGCCACGTTACCAATATTCTGAAAGAGAGAATTTTACAGAATACAGCTGTCAGTGAGTGTGGCCATTGTTTGCTCCCCGGTGATAATTACCCAGATTGGTTAACCTTTGATTGTGAAGATTCTTCTGTAATTTTTGAAGTTCCTCAAGTGAATGGACATAACTTGAAGACAGTGATGTGCATTATCCATTATTCTGCACCAGATGACATAACAACAGATGGCCTTAAAAATGTGTTGGTGATAAATCACACAAAGGCCATCATTCAGCTTTATAAGAGAGACACATTAGCCTCCTTTGAAAATGAGGAGTGGCAGAGAGTAGTATCAAATATAGAACCTGGTAACAAAGTGCAGGTGGTGGTTGTTTTTGAGAATGGATTCATTGTGAAGAAGACATCAGTTTATCTAATTTATGATGAACCAAATGATGAGAAAATGGAACACTGCTATGCAGCAGACAAGAATGAAATTGTTTCTAGTGATGATGAAAATGAACGTGCTGTCAGGAGAGTCCCTCGTCAAGTGGAGTCCACGGATGACTTCAAACAAAAACAGAAAAGAAGATTATTGGAGTAG 6225 0.3984 MICGGREVNRDDLTCSPPPESPFNPKPNHETDSEHPPSYETDLESLDPDPSRSIYDVFLSFRGADTRGSFTSHLFAALQNAGINVYRDDDSLRRGDDISSSLPGAIGESQISVIVFSKNYANSRWCLRELEKIMECHRTTGQVVLPVFYDVDPSEVRHVTGEFGRAFQNLINRTTMDEDRMLSSSTPLTREIVENWKMALREAGGIAGFVVLNSRNENEAIKNVVENVTRLLDKTDLFIAANPVGVESRVEHMIQLLDNQQSNDVVLLGIWGMGGIGKTTIAKAFYNKIGRNFEGRSFLANIREVWEQDAGQVRLQGQLLFDIFKETTTKIHNIDSGKNILKERLCHKRVLVVLDDVNKLDQLNALCGSHKWFGSGSRIIITTRDKHILTGNRVDRVYTMKEMDESESIELFSWHAFKQASPKEDFAGISRNVVEYSGGLPLALEVLGSYLFDRGITEWECVLEKLKRIPNDQVQKKLKISYDGLTDYTEKEIFLDIACFFIGMDRNDVIHILNGCGLFADNGVRVLVERSLVTVDGKNRLGMHDLLRDMGREIIREESPKEPEERSRLWFHKDVVDVLSDQSGTKAVEGLTLKLPRTNTKCFSTNAFKKMKRLRLLQLSSVQLDGDFEYLSRNLRWLCWQGFPLTCIPSNFYQGNLVSIELENSNVQLVWKEAQRMEMLKILNLSHSRYLTQTPDFSNMPNLEKLVLTDCPSLSKVSHSIGHLNKVLLINLKDCISLRNLPRSIYKLKSLKTLILSGCLKIDKLEEDLEQMESLTTLIADKTAITRVPFSIVRSKSIGYISLCGYKGFSRDVFPSIIWSWMSPTNNPLSLVQNTAGMSSVVSLDVSNSSSHELSSISKDLPNLRSLWVECGSELQLSRYAATILDALYATNSKEMESSATTSSKVSNMETPALRPKGSWKSLLIQMGLNCHVTNILKERILQNTAVSECGHCLLPGDNYPDWLTFDCEDSSVIFEVPQVNGHNLKTVMCIIHYSAPDLDSDPDPSRSIYDVFLSFRGEDTRASFTSHLYAALKNAGIVVFRDDDSLGRGDEISPSLLRAIEESQISVIVFSKNYANSRWSLQELEKIMECHRTTGQVVLPVFCGVDPSEVRHLTGEFGKGFRDLINRTTMDEEIVENWKKALREAGGIAGFVPLNSRNENEAIKNVVENVTRLLDKTDLFIAANPVGVESRVEHMIQLLDNQQSNDVVLLGIWGMGGIGKTTIAKAFYNKIGRNFEGRSFLANIREVWEQDAGQVRLQGQLLFDIFKETTTKIHNIDSGKNILKERLCHKRVLVVLDDVNKLDQLNALCGSHKWFGSGSRIIITTRDKHILTGNRVDRVYTMKEMDESESIELFSWHAFKQASPKEDFAGISRNVVEYSGGLPLALEVLGSYLFDRGITEWECVLEKLKRIPNDQVQKKLKISYDGLTDYTEKEIFLDIACFFIGMDRNDVIHILNGCGLFADNGVRVLVERSLVTVDGKNRLGMHDLLRDMGREIIREESPKEPEERSRLWFHKDVVDVLSDQSGTKAVEGLTLKLPRTNTKCFSTNAFKKMKRLRLLQLSSVQLDGDFEYLSRNLRWLCWQGFPLTCIPSNFYQGNLVSIELENSNVQLVWKEAQRMEMLKILNLSHSRYLTQTPDFSNMPNLEKLVLTDCPSLSKVSHSIGHLNKVLLINLKDCISLRNLPRSIYKLKSLKTLILSGCLKIDKLEEDLEQMESLTTLIADKTAITRVPFSIVRSKSIGYISLCGYKGFSRDVFPSIIWSWMSPTNNPLSLVQNTAGMSSVVSLDVSNSSSHELSSISKDLPNLRSLWVECGSELQLSRYAATILDALYATNSKEMESSATTSSKVSNMETPALIEWSSLAHISGPKGSWKSLLIQMGLNCHVTNILKERILQNTAVSECGHCLLPGDNYPDWLTFDCEDSSVIFEVPQVNGHNLKTVMCIIHYSAPDDITTDGLKNVLVINHTKAIIQLYKRDTLASFENEEWQRVVSNIEPGNKVQVVVVFENGFIVKKTSVYLIYDEPNDEKMEHCYAADKNEIVSSDDENERAVRRVPRQVESTDDFKQKQKRRLLE. 2075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10723 2074 SMART till_3 54 206 IPR000157 GO:0007165
Seca4g10723 2074 SMART till_3 1009 1149 IPR000157 GO:0007165
Seca4g10723 2074 SUPERFAMILY L domain-like 543 871 - -
Seca4g10723 2074 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1178 1440 IPR027417 -
Seca4g10723 2074 Gene3D - 1008 1172 IPR035897 -
Seca4g10723 2074 Gene3D - 53 229 IPR035897 -
Seca4g10723 2074 Gene3D Ribonuclease Inhibitor 586 906 IPR032675 -
Seca4g10723 2074 Gene3D - 230 396 IPR027417 -
Seca4g10723 2074 Gene3D - 1173 1339 IPR027417 -
Seca4g10723 2074 Gene3D - 402 486 IPR042197 -
Seca4g10723 2074 Gene3D - 1345 1429 IPR042197 -
Seca4g10723 2074 FunFam Disease resistance protein (TIR-NBS-LRR class) 51 234 - -
Seca4g10723 2074 Gene3D Ribonuclease Inhibitor 1534 1679 IPR032675 -
Seca4g10723 2074 Gene3D Ribonuclease Inhibitor 1680 1836 IPR032675 -
Seca4g10723 2074 MobiDBLite consensus disorder prediction 1 48 - -
Seca4g10723 2074 Coils Coil 2065 2074 - -
Seca4g10723 2074 SUPERFAMILY Toll/Interleukin receptor TIR domain 1002 1152 IPR035897 -
Seca4g10723 2074 Pfam TIR domain 55 228 IPR000157 GO:0007165
Seca4g10723 2074 Pfam TIR domain 1010 1173 IPR000157 GO:0007165
Seca4g10723 2074 ProSiteProfiles TIR domain profile. 53 232 IPR000157 GO:0007165
Seca4g10723 2074 PRINTS Disease resistance protein signature 267 282 - -
Seca4g10723 2074 PRINTS Disease resistance protein signature 437 451 - -
Seca4g10723 2074 PRINTS Disease resistance protein signature 344 358 - -
Seca4g10723 2074 PRINTS Disease resistance protein signature 746 762 - -
Seca4g10723 2074 ProSiteProfiles TIR domain profile. 1008 1175 IPR000157 GO:0007165
Seca4g10723 2074 MobiDBLite consensus disorder prediction 2043 2074 - -
Seca4g10723 2074 FunFam Disease resistance protein (TIR-NBS-LRR class) 1006 1177 - -
Seca4g10723 2074 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1010 1822 IPR044974 GO:0006952
Seca4g10723 2074 SUPERFAMILY Toll/Interleukin receptor TIR domain 49 209 IPR035897 -
Seca4g10723 2074 MobiDBLite consensus disorder prediction 27 48 - -
Seca4g10723 2074 SMART AAA_5 1207 1347 IPR003593 GO:0016887
Seca4g10723 2074 SMART AAA_5 264 404 IPR003593 GO:0016887
Seca4g10723 2074 Pfam NB-ARC domain 247 483 IPR002182 GO:0043531
Seca4g10723 2074 Pfam NB-ARC domain 1190 1426 IPR002182 GO:0043531
Seca4g10723 2074 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 235 497 IPR027417 -
Seca4g10723 2074 Coils Coil 762 782 - -
Seca4g10723 2074 Coils Coil 1705 1725 - -
Seca4g10723 2074 SUPERFAMILY L domain-like 1486 1814 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10723 Seca-Chr4 244074069 244097158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10723 55 792 WRKY Transcription Factor Family AT4G12020 32.053 8.01e-87 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10723 - - gmx:100808685 1551.18