Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10661 ATGAAGATGCACATGAACCTGTATTGGGGCAAAGATGCCATAGTACTTTTCTCTGGGTGGCCTAACCATAGTGTTGCAATGTACATCTTAGCTATCTTGTTTGTGTTTTTCCTTGCAATGTTTGCTGAGGTTCTGTCCAACCAGCCCACCATAAAGCGTGGGACTAATCCCATAAAGGGAGGGTTGGCTCAGGCTACCATCTTCTTTTTTCGCATTAGTTTCCTTTACTTGGTGATGCTGGCTGTCATGTCCTTCAACTTGGGAATCTTCATAGCTGCTGTGGCTGGCCATACCTTGGGATTCTTTTTTGCTAAGTCTCGTGCTCTTGCTATTGCCAACAGATCAGAACAACGTGGGTCCTCCATTACTGAGAAGGTTTAA 381 0.4488 MKMHMNLYWGKDAIVLFSGWPNHSVAMYILAILFVFFLAMFAEVLSNQPTIKRGTNPIKGGLAQATIFFFRISFLYLVMLAVMSFNLGIFIAAVAGHTLGFFFAKSRALAIANRSEQRGSSITEKV. 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10661 126 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 116 IPR007274 GO:0005375|GO:0016020|GO:0035434
Seca4g10661 126 Pfam Ctr copper transporter family 7 46 IPR007274 GO:0005375|GO:0016020|GO:0035434
Seca4g10661 126 Pfam Ctr copper transporter family 57 103 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10661 Seca-Chr4 243354350 243354730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10661 3 108 Inorganic Solute Cotransporters AT5G59040 47.170 1.85e-28 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10661 K14686 - gmx:100808693 202.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g10661 4 243354350 243354730 Seca4g10661 4 243354350 243354730 ECH