Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10653 ATGGCTAAAGAGCATGGAGAAGTGAGGGTATTGGGAAAATGGGCAAGCCCATTTAGCAACAGAGTTGATCTTGCTCTGAAACTGAAAGGAGTTCCATACAAATACTCAGAGGAAGATCTAGCCAACAAGAGTGCTGACCTTCTCCAATACAACCCCGTTTACAAGAAGGTCCCAATTCTTGTTCACAATGGAAACCCAATAGCTGAGTCTCTTGTCATTCTTGAATACATAGACGACACATGGAATAACAACCCCTTTTTGCCTCAAGACCCTTATCAAAGAGCCATGGCTCGTTTCTGGTGTAAGACCCTAGATGACAAGATCTTGCCTGCTATATGGAATGCTTGCTGGAGTGATGAGAAGGGGCGTGAGAAAGCTGTGGAGGAAGCATTGGAAGCTTTGAAGATACTGCAGGATGAATTGAAGGAGAGAAGGTTCTTTGGAGGAGAGACCATAGGACTGGTAGATATTGCTGCCAATTTCATTGGGTATTGGGTTGCTATATTGCAAGAAATTGCAGGGTTGGAGTTGCTTACCATTGAGAAATTTCCCAAGCTGTCAATGGCTGAAGACTACGGAGAAGTTCAATTTTTTGGTGTAGGGGGAAGCCCATTTGCTCGAAGGGTACAGATTGCTCTGAAACTGAAGGGAGTTCGATACACTTACGTTGAAGAAAATCTTAGAAACAAAAGTGATCTCCTTCTCAAATACAACCCTGTTCACAAGAAGGTGCCTGTGCTTGTCCACAATGGAACACCCTTAGCTGAGTCCCTTGTCATCCTTGAATACATTGATGAGACCTGGAAGAATCATCCCCTCTTGCCTCAACAACCATATGAAAGAGCCTTGGCTCGTTTCTGGTCAAGGTTCATTGATGACAAATGCCTGCCTGCAATATCAAAGGCTGCATGGACTGGGGACAAGGAGCAACGTGAGAAGGGCATTGAAGAATCATTGGAGGCTCTGCAATTTCTTGAGAATGAACTAAAACACAAATTCTTTGGTGGAGAGACTATAGGTCTGGTGGACATTGCTGGTGGCTACTTAGCTTTCTGGCTACCTGTGCTTGAAGAAGCCGTGGGGTTTAAGTTGCTGAGCAGTGAGAAATTTCCCAAACTTCATAAATGGAGTCAAGAATTCACCAACCACCCTGTTGTCAAAGAGAACCTGCCCCCCAGAGATGGGCTCTTGGGCTTTTTTAAAGCCCGATACGCTGCTTCCATTGCTGCTTCAAAATAA 1239 0.4471 MAKEHGEVRVLGKWASPFSNRVDLALKLKGVPYKYSEEDLANKSADLLQYNPVYKKVPILVHNGNPIAESLVILEYIDDTWNNNPFLPQDPYQRAMARFWCKTLDDKILPAIWNACWSDEKGREKAVEEALEALKILQDELKERRFFGGETIGLVDIAANFIGYWVAILQEIAGLELLTIEKFPKLSMAEDYGEVQFFGVGGSPFARRVQIALKLKGVRYTYVEENLRNKSDLLLKYNPVHKKVPVLVHNGTPLAESLVILEYIDETWKNHPLLPQQPYERALARFWSRFIDDKCLPAISKAAWTGDKEQREKGIEESLEALQFLENELKHKFFGGETIGLVDIAGGYLAFWLPVLEEAVGFKLLSSEKFPKLHKWSQEFTNHPVVKENLPPRDGLLGFFKARYAASIAASK. 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10653 412 CDD GST_C_Tau 91 195 IPR045074 GO:0004364|GO:0006749
Seca4g10653 412 CDD GST_N_Tau 8 81 - -
Seca4g10653 412 FunFam Tau class glutathione S-transferase 87 197 - -
Seca4g10653 412 Gene3D - 87 191 - -
Seca4g10653 412 SUPERFAMILY Thioredoxin-like 195 295 IPR036249 -
Seca4g10653 412 CDD GST_N_Tau 195 268 - -
Seca4g10653 412 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 187 IPR010987 -
Seca4g10653 412 SFLD Main.3: Omega- and Tau-like 5 187 IPR045073 -
Seca4g10653 412 SFLD Main.3: Omega- and Tau-like 193 409 IPR045073 -
Seca4g10653 412 SUPERFAMILY GST C-terminal domain-like 79 186 IPR036282 -
Seca4g10653 412 FunFam Tau class glutathione S-transferase 1 89 - -
Seca4g10653 412 Pfam Glutathione S-transferase, N-terminal domain 8 78 IPR004045 -
Seca4g10653 412 Pfam Glutathione S-transferase, N-terminal domain 195 266 IPR004045 -
Seca4g10653 412 Gene3D Glutaredoxin 1 86 - -
Seca4g10653 412 Gene3D Glutaredoxin 192 276 - -
Seca4g10653 412 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 193 272 IPR004045 -
Seca4g10653 412 CDD GST_C_Tau 278 403 IPR045074 GO:0004364|GO:0006749
Seca4g10653 412 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Seca4g10653 412 Gene3D - 277 411 - -
Seca4g10653 412 Coils Coil 124 144 - -
Seca4g10653 412 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 277 408 IPR010987 -
Seca4g10653 412 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Seca4g10653 412 Pfam Glutathione S-transferase, C-terminal domain 292 384 IPR004046 -
Seca4g10653 412 Pfam Glutathione S-transferase, C-terminal domain 109 187 IPR004046 -
Seca4g10653 412 Coils Coil 308 328 - -
Seca4g10653 412 FunFam Tau class glutathione S-transferase 274 410 - -
Seca4g10653 412 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 201 394 IPR045073 -
Seca4g10653 412 FunFam Tau class glutathione S-transferase 188 276 - -
Seca4g10653 412 SFLD Main (cytGST) 193 409 - -
Seca4g10653 412 SFLD Main (cytGST) 5 187 - -
Seca4g10653 412 SUPERFAMILY GST C-terminal domain-like 266 404 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10653 Seca-Chr4 243245474 243250972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10653 195 406 Glutathione S-transferase Gene Family AT3G09270 51.628 1.75e-78 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10653 K00799 - egt:105969932 445.277