Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10621 ATGACCATGGAGGAGAAGCCTGTCTCTGATAACCGAATGCTCGTGTATGTACCTCCGCATCCGTTGATCAAGCACTGGATTTCGGTTCTGAGGAATGAACAAACTCCTTGTCCCATCTTCAGAAATGCAATGGCTGAGTTGGGAAGGTTACTAATGTATGAAGCTTCAAGGGATTGGTTGCCCACTGTTTCTGGAGAGATTCAATCACCATTGGGTGTTGCCTCAGTGGAGTTCGTTGATCCAAGGGAGCCTGTGGCTTGGCTTTCTGCAAGCAATGACCTTTTACCAGATTTTCAGGTAATTCCAATCTTGAGAGCTGGTCTTGCTCTTGCTGAACATGCACCATCAATCTTACCTGCAACAAAAACCTATCATCTAGGAGTAAGCAGAGATGAGGAAACTCTTCAGCCAACTGTATATTTGAACAAGTTACCTGACAAATTTCCAGAAGGATCTAAAGTATTCGTAGTTGATCCTATGCTGGCAACAGGTGGAACCATAGTGGCAGCCCTGAATCTGTTAAAGGAACGTGGAGTTAGCAACAATCGGATTAAAGTGGTAAGGAATAATATCTGCTGTCGCTTCCCCTCCGGCCCTTCAAAAGCTGAGCGAGCAGTTCCCTGGGTAGTCACATTACGTGTGTGTTTGGTTTCCATCAAAATAATGTCTCAAACGTGGATCTAG 684 0.4503 MTMEEKPVSDNRMLVYVPPHPLIKHWISVLRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPLGVASVEFVDPREPVAWLSASNDLLPDFQVIPILRAGLALAEHAPSILPATKTYHLGVSRDEETLQPTVYLNKLPDKFPEGSKVFVVDPMLATGGTIVAALNLLKERGVSNNRIKVVRNNICCRFPSGPSKAERAVPWVVTLRVCLVSIKIMSQTWI. 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10621 227 SUPERFAMILY PRTase-like 15 210 IPR029057 -
Seca4g10621 227 CDD PRTases_typeI 100 212 IPR000836 -
Seca4g10621 227 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 16 187 - -
Seca4g10621 227 Gene3D - 4 220 IPR029057 -
Seca4g10621 227 Pfam Uracil phosphoribosyltransferase 17 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10621 Seca-Chr4 242699129 242704376 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10621 9 187 PRT Gene Family AT3G53900 73.743 9.86e-94 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10621 K00761 - gmx:100797953 317.775