Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10599 ATGTTTAACATTTTGGATCGCTTTTGCGAAGATAATTCACAATTGTTGAGGAGATCTCTTTCTCAGGAGTTGAAGGTCTCTCTTAGTCCTCATCTCACGGTGCCAGAATTAAGCTGCCAAATTTATGGTTTTTTCCTCGCCACTAAATGGGCCAATGATGTGAGTGTTCGCAAGTCACTGCATATTCGAGAGGGAACTATAGGGGAATGGGAACGTTGTTACACTACTGATTTTAAGTTTGAGATCCCCAGTAGCTTTGAGTTTCATGTAAATCTCAGTGCAAAAGGCTACCGTTCCTTGATATACAGTGGAGATCATGATCTAGTTGTTCCTTTCATGTCTACTCAAGCGTGGATAAGGGCTCTAAACTACTCCATTGTGGAAGATTGGAGGCCATGGCTTGTTGATGGCCAAGTCGCAGGATACACAAGGACTTACTCGAATCGAATGACATTTGCTACTGTGAAGGGTTCAGGACATACAGCTCCTGAGTACAAGCCTGACGAAGGTTTTGCCATGTTCACTAGGTGGATATCTAGTAAGCCTTTGTAA 552 0.4293 MFNILDRFCEDNSQLLRRSLSQELKVSLSPHLTVPELSCQIYGFFLATKWANDVSVRKSLHIREGTIGEWERCYTTDFKFEIPSSFEFHVNLSAKGYRSLIYSGDHDLVVPFMSTQAWIRALNYSIVEDWRPWLVDGQVAGYTRTYSNRMTFATVKGSGHTAPEYKPDEGFAMFTRWISSKPL. 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10599 183 Pfam Serine carboxypeptidase 36 179 IPR001563 GO:0004185|GO:0006508
Seca4g10599 183 Gene3D alpha/beta hydrolase 1 182 IPR029058 -
Seca4g10599 183 SUPERFAMILY alpha/beta-Hydrolases 36 182 IPR029058 -
Seca4g10599 183 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 2 167 IPR001563 GO:0004185|GO:0006508
Seca4g10599 183 FunFam Carboxypeptidase 86 180 - -
Seca4g10599 183 FunFam Carboxypeptidase 38 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10599 Seca-Chr4 242373031 242374719 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10599 46 183 Calmodulin-binding Proteins AT2G22960 59.712 1.83e-60 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10599 K16296 - gmx:100780069 304.679