Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10598 ATGATGATTTCTACTTCTACTAATTCACGTTGCTATTGTCAGATTCTACTTGCTCTTTGCTGCATGCAGATATCATCTCAGCTCCAATTCCAAACCTCTCGCTCAAAGGTAGACATCCTTCCCGGCTTTCAAGGTCCTCTTCCCTTTCAACTCGAAACAGGGTATGTGGGACTAGGGGAAAATAATGATGATGATATGCAGGTGTTCTACTACTTTATTAAGTCAGAGAACAACCCTGAGAAAGACCCTCTTATGCTTTGGCTAACTGGTGGTCCTGGCTGCTCTTCCTTTTCTGGCCTTGCATTTCAAATAGGTCCACTTGCATTTGAAATCAAGGAGTATGACGGAAACTTGCCTAATTTGATCTTGAGGCCACAATCCTGGACAAAGGTATGTAGCATTATTTTTGTAGATTTGCCACTTGGAACTGGTTTCTCATATGCAAAAAATCTCCTTGCTCAACGAAGTGATTGGAAATTAGTTCACCATGCCCATCAATTCCTTAGGAAGTGGCTCATTGATCACTCGGAATTTCTTTCGAATGATTTGTACATTGGAGCTGATTCATACTCCGGCATTCCTGCTCCTGCAATTGTTCAAGAAATTTCAAATGGAAATGAAAAAGGTTTCCAACCATGGATAAATCTCCAGGGATATCTTCTCGGGAACCCTATAACAACACACAGAGAAAAAAATCATCAAATCCCATGTGCTCATGGAATGGGGCTTATTTCTGATGAACTCTATGAGTCACTGCAGAGAAACTGTAAAGGAGAGTATATATATATATAG 792 0.4053 MMISTSTNSRCYCQILLALCCMQISSQLQFQTSRSKVDILPGFQGPLPFQLETGYVGLGENNDDDMQVFYYFIKSENNPEKDPLMLWLTGGPGCSSFSGLAFQIGPLAFEIKEYDGNLPNLILRPQSWTKVCSIIFVDLPLGTGFSYAKNLLAQRSDWKLVHHAHQFLRKWLIDHSEFLSNDLYIGADSYSGIPAPAIVQEISNGNEKGFQPWINLQGYLLGNPITTHREKNHQIPCAHGMGLISDELYESLQRNCKGEYIYI. 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10598 263 SUPERFAMILY alpha/beta-Hydrolases 40 259 IPR029058 -
Seca4g10598 263 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 38 260 IPR001563 GO:0004185|GO:0006508
Seca4g10598 263 Gene3D alpha/beta hydrolase 31 262 IPR029058 -
Seca4g10598 263 Pfam Serine carboxypeptidase 41 258 IPR001563 GO:0004185|GO:0006508
Seca4g10598 263 FunFam Serine carboxypeptidase-like 19 30 263 - -
Seca4g10598 263 PRINTS Carboxypeptidase C serine protease (S10) family signature 171 196 IPR001563 GO:0004185|GO:0006508
Seca4g10598 263 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 136 IPR001563 GO:0004185|GO:0006508
Seca4g10598 263 PRINTS Carboxypeptidase C serine protease (S10) family signature 137 147 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10598 Seca-Chr4 242368094 242372860 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10598 33 68 Calmodulin-binding Proteins AT2G22960 55.556 1.46e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10598 K16296 - tpra:123922058 422.935