Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10581 ATGAAAGATTTCTCATCTGGTCACCCTAATTCATTCATCAACAACCTTATTCTCAAGTATGGACGAACTGGTATTTACAAGACTCACTTGTATGGAAATCCAAGCATCATTATTTGTGAGTCTCAGATGTGTAGACGAGTACTAACAGATGATGTGAACTTTAAAAGTGGCTATCCAAAATCTGCCAGTAGATTGGTACGAAGTAGACCCATTGATGATGAATTTAGTCCCATGGAACAAAAGCGTTTTCGGCGCCTAGTCAATGCTCCCATTGCAGGTCACAATTTAGCAATGTACCTTGAACGTATTGAGAATATCATGGTCAATTCGTTAGAAGAATTGTCAAGTATGAATAACACGATTAAGTTTTCGAAAGAGATGAAAAAGATTTCCTTTAAAGTCATCATGCATGTTTTTATGGGGCGCTCTTACAATGAACACATCGTTACCAAAATAGGAAGTTCTTTCACCGATTTGTATAATGGCATGTTCTCTGCCCCCATTAATGCTCCCGGTTTTGCTTTCCATAAAGCACTAAAGGCACATAAGAAGCTGGTCAAGTTAGTTCAACCGGTTGTGGTTGAAAGGAGGCTGATGATAAAAAATGGTCAAGTTGGTGAAAAGAAAGATCTTATTGATATTCTTTTGGAAATGAAGGATGAGAATGGTGAGAAATTGGAGGATGAGGATATTATGGACTTATTGATAGCGTCTTTATTTGCTGGTCATGAAACCGCAGCAACTGCTCTGATGTGGTCAATTACATATCTTACACAACATCCACATTTCTTGAAAAAAGCCAAGGAAGAACAAGAGAAAATCATGAAGACAAGACTACCCTCACAGAAACAATTAACTCTTAATGAAATTAAGCAAATGGTTTATCTTTCTCAGGTAATCGATGAAACGTTGCGTTGTGTCAACATTGTCTTTTCAATTTTTCGAGAGGCAACTAATGACGTGAACATCAATGGTTGTTATATCATACCAAAAGGATGGAAAGTGCTAGTTTGGTTAAGAGCTATTCATATGAATCCTGAATATTACCCAAATCCAGACGAATTTAATCCATCTAGATGGGATGATTACAATGCAAAACCAAAAACCTTCCTTCCTTTTGGAGTAGGAAGTAGGCTCTGTCCCGGAAGTGACTTAGCGAAACTTGAAATTTCTGTATTTCTACATCATTTCCTCCTTAATTACAAGTTGGAGCGACTAAATCCAGAATGTCCGGTTAGTAGCTTGCCAGCACCAAAGTTCATCGACAATTGTCTCGCTAAGGTGTTAAAGATATCAGGTGTTTAG 1305 0.377 MKDFSSGHPNSFINNLILKYGRTGIYKTHLYGNPSIIICESQMCRRVLTDDVNFKSGYPKSASRLVRSRPIDDEFSPMEQKRFRRLVNAPIAGHNLAMYLERIENIMVNSLEELSSMNNTIKFSKEMKKISFKVIMHVFMGRSYNEHIVTKIGSSFTDLYNGMFSAPINAPGFAFHKALKAHKKLVKLVQPVVVERRLMIKNGQVGEKKDLIDILLEMKDENGEKLEDEDIMDLLIASLFAGHETAATALMWSITYLTQHPHFLKKAKEEQEKIMKTRLPSQKQLTLNEIKQMVYLSQVIDETLRCVNIVFSIFREATNDVNINGCYIIPKGWKVLVWLRAIHMNPEYYPNPDEFNPSRWDDYNAKPKTFLPFGVGSRLCPGSDLAKLEISVFLHHFLLNYKLERLNPECPVSSLPAPKFIDNCLAKVLKISGV. 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10581 434 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 373 382 IPR017972 GO:0005506|GO:0016705
Seca4g10581 434 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10581 434 PRINTS P450 superfamily signature 298 309 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10581 434 PRINTS P450 superfamily signature 371 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10581 434 PRINTS P450 superfamily signature 241 258 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10581 434 Coils Coil 100 120 - -
Seca4g10581 434 Gene3D Cytochrome P450 2 429 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10581 434 Pfam Cytochrome P450 6 412 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10581 434 SUPERFAMILY Cytochrome P450 7 409 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10581 434 CDD CYP90-like 17 428 - -
Seca4g10581 434 PRINTS E-class P450 group I signature 380 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10581 434 PRINTS E-class P450 group I signature 250 276 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10581 434 PRINTS E-class P450 group I signature 338 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10581 434 PRINTS E-class P450 group I signature 370 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10581 434 PRINTS E-class P450 group I signature 230 247 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10581 434 PANTHER CYTOCHROME P450 26 8 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10581 Seca-Chr4 242027355 242030208 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10581 1 430 Cytochrome P450 AT2G32440 49.769 6.05e-152 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10581 K04123 - ag:BAG68929 642.114