Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10580 ATGGAACTACACTTGCTCTCGGTGTGTGTTACCACTTTGTTAGCATGCTACATTTTCGTAGTCAAGTTTTTGAGGAGGTTGAATGGGTGGTATTATGATCTGAAACTAAGAAATAAACAGTACCCACTTCCTCCTGGTGATATGGGATGGCCTCTTATTGGCAATCTTTTAGCCTTCATGAAAGATTTCTCATCCGGTCACCCTAATTCATTCATCAACAACCTTGTTCTCAAGTATGGACAAACTGGTATTTACAAGACTCACTTGTATGGAAATCCAAGCATCATTATTTGTGAGTCTCAGATGTGTAGGCGAGTGTTAACGGATGATGTGAACTTTAAAAATGGTAATCCAAAATCCGTCAAAAGATTGGTACGAATTAGAAGTTCCATAGATGATGTATCTAGTGCAGAACCTAGGCGTTTTCGACGCCTAGTCATTGCTCCCCTTATGGGTCACAATGCATTAGCAATGTACCTAGAACGTATTGAGAATATCATGGTTAATTCGTTAGAAGAGTTGTCAAGTATGAAACACTCGGTTGAGTTTTTGAAAGAGATGAAAAAGATTTCCTTTAAAGTCATCATGCATGTTTTTATGGGGCGCTCTTACAATGAACACATCATTACCAAAATAGGAAGTTCGTTTACCAATATATATAATGGCTTGTTCTCTATCCCCATTAACGTTCCAGGTTTTACTTTCCGCAAAGCACTCAAGGCACGTCAAAAGCTGATCATGTTAGTTCAACCTGTTGTGGATGAAAGGAGGTTGATGATAAAAAATGGTCAAGTGGGGGAAAAGAAAGATCTTGTTGATAATCTTTTGGAAATCGAGGATGAGAATGGTCAGAAATTGGAGGATGAGGACATTATTGACATATTGATAGCATTTTTATTTGCAGGTCATGAAAGCACATCAATGGTTCTGATGTGGTCAATTACATATCTTACACAACATCCACATTTCTTGAAAAAAGCCAAGGAAGAACAAGAGGAAATCATAAAGACAAGACTACCCTCACAAAAACAATTAACTCTTAATGAAATTAAGCAAATGGTTTATCTTTCTCAGGTAATCGATGAAACGTTGCGTTGTACCAACATTGCCTTTGGAACTTTTCGAGAGGCAACTACTGACGTGAACATCAATGGTTATATCATACCAAAAGGATGGAGAGTGATAGTTTGGTTAAGAGCTATTCATATGAATCCTGAATATCACCCAAATCCAGAAGAATTTAATCCATCTAGATGGGATGATTACAATGCCAAAGCAAGAACCTTCCTTCCTTTTGGAGCAGGAAGTAGGCTCTTTCCCGGAAGTGACTTAGCGAAACTTGAAACTTCCGTATTTCTACATTATTTCCTCCTTAATTACAAGTTGGAGCGACTAAATCCAGAATGCCCGGTTACTAGCTTGCCAGCACCAAAGTTCATCGACAATTGTCTCGCTAAGGTGTTAAAGATCTCAGGTGTCTAG 1482 0.3839 MELHLLSVCVTTLLACYIFVVKFLRRLNGWYYDLKLRNKQYPLPPGDMGWPLIGNLLAFMKDFSSGHPNSFINNLVLKYGQTGIYKTHLYGNPSIIICESQMCRRVLTDDVNFKNGNPKSVKRLVRIRSSIDDVSSAEPRRFRRLVIAPLMGHNALAMYLERIENIMVNSLEELSSMKHSVEFLKEMKKISFKVIMHVFMGRSYNEHIITKIGSSFTNIYNGLFSIPINVPGFTFRKALKARQKLIMLVQPVVDERRLMIKNGQVGEKKDLVDNLLEIEDENGQKLEDEDIIDILIAFLFAGHESTSMVLMWSITYLTQHPHFLKKAKEEQEEIIKTRLPSQKQLTLNEIKQMVYLSQVIDETLRCTNIAFGTFREATTDVNINGYIIPKGWRVIVWLRAIHMNPEYHPNPEEFNPSRWDDYNAKARTFLPFGAGSRLFPGSDLAKLETSVFLHYFLLNYKLERLNPECPVTSLPAPKFIDNCLAKVLKISGV. 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10580 493 CDD CYP90-like 76 487 - -
Seca4g10580 493 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10580 493 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10580 493 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10580 493 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10580 493 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10580 493 Gene3D Cytochrome P450 34 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10580 493 PANTHER CYTOCHROME P450 26 39 470 - -
Seca4g10580 493 SUPERFAMILY Cytochrome P450 38 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10580 493 Pfam Cytochrome P450 44 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10580 493 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10580 493 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10580 493 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10580 Seca-Chr4 241995586 242001921 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10580 13 489 Cytochrome P450 AT2G32440 48.536 5.92e-171 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10580 K04123 K17875 ag:BAG68929 757.673