Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10579 ATGTACCTAGAACGTGTTGAGAATATCATGGTCAATTCGTTAGAAGAGTTGTCAAGTATGAAACACCCGGTTGAGTTTTTGAAAGAGATGAAAAAAATTTCCTTAAAAGTCATCATGTATGTTTTTATGGGGCGCTCTTACAATGAAGACTTCATTACCAAAATAGGAAGTTCGTTTACCGATATGTTTAATGGCTTGTTTTCTATCCCCATTAACGCTCCCGGTTTTACTTTCCACAAAGCACTCAAGGCACGTCAAAAGTTAATCAAGTTAGTTCAACCTGTTGTGGATGAAAGGAGGTTGATGATAAAAAATGGTCAAGTGGGGGAAAAGAAAGATCTTGTTGATAATCTTTTGAAAATCGAGGATGAGAATGGTCAGAAATTGGAGGATGACGACATTATTGAATTATTGATAGCGGCTTTATTTGCAGGTCATGAAAGCACATCAATCATTCTGATGTGGTCAATTACATATCTTACACAACATCCACATTTCTTGAAAAAAGCCAAGGAAGAACAAGAGGAAATCATGAAGACAAGACTACCCTCACAAAAACATTTAACTTTTAATGAAATTAAGCAAATGGTTTATCTTTCTCAGCTAATCGATGAAACGTTGCGTTGTACAAACATTGCCTTTGCAACTTTTCGAGAGGCAACTACTGACATGAATATCAATGGTTATATCATACCAAAAGGATGGAGAGTGATAGTTTGGTTAAGAGCTATTCATATGAATCCTGAATATCACCCAAATCCAGAAGAATTTAATCCATCTAGATGGGATGATTACAATGCCAAAGCAAGAACCTTCCTTCCTTTTGGAGCAGGAAGTAGGCTCTGTCCCGGAAGTGACTTAGCGAAACTTGAAATTTCTGTATTTTTACATTATTTCCTCCTTAATTACAAGTTGGAGCGATTAAATCCAGAATGCCCGGTTACTAGCTTGCCAGCACCAAAGTTCATCGACAACTGTCTCGCTAAGGTGTTAAAGATCTCATGTATTTAG 1011 0.3689 MYLERVENIMVNSLEELSSMKHPVEFLKEMKKISLKVIMYVFMGRSYNEDFITKIGSSFTDMFNGLFSIPINAPGFTFHKALKARQKLIKLVQPVVDERRLMIKNGQVGEKKDLVDNLLKIEDENGQKLEDDDIIELLIAALFAGHESTSIILMWSITYLTQHPHFLKKAKEEQEEIMKTRLPSQKHLTFNEIKQMVYLSQLIDETLRCTNIAFATFREATTDMNINGYIIPKGWRVIVWLRAIHMNPEYHPNPEEFNPSRWDDYNAKARTFLPFGAGSRLCPGSDLAKLEISVFLHYFLLNYKLERLNPECPVTSLPAPKFIDNCLAKVLKISCI. 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10579 336 Gene3D Cytochrome P450 1 332 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10579 336 PRINTS E-class P450 group I signature 240 264 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10579 336 PRINTS E-class P450 group I signature 272 282 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10579 336 PRINTS E-class P450 group I signature 133 150 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10579 336 PRINTS E-class P450 group I signature 153 179 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10579 336 PRINTS E-class P450 group I signature 282 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10579 336 PRINTS P450 superfamily signature 144 161 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10579 336 PRINTS P450 superfamily signature 201 212 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10579 336 PRINTS P450 superfamily signature 282 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10579 336 PRINTS P450 superfamily signature 273 282 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10579 336 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 275 284 IPR017972 GO:0005506|GO:0016705
Seca4g10579 336 Pfam Cytochrome P450 4 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10579 336 PANTHER CYTOCHROME P450 26 2 313 - -
Seca4g10579 336 SUPERFAMILY Cytochrome P450 5 312 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10579 Seca-Chr4 241973010 241975520 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10579 1 332 Cytochrome P450 AT2G32440 48.795 6.00e-118 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10579 K04123 - ag:BAG68929 539.65