Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10538 ATGCTTCCATATCTATTGCCTCTCTTCTTCATCTTTCCCCTCCTCTTCTTCTTCTTCGCGAAGAAAGACATAGCTCCTTCATCTTCATGTAGCATCACCCTCCCAAAATCATACCCACTCATAGGTTCCTACTTGGCTATCAAAGCCAACGCCCACCGCCGTATCCAATGGTTTTCCGATATTGTCCGAATCTCACCACCTGCCACTCTCACTCTCAACCACCCCATGGGCAGACAGCAAGTCATCACCGCCAACCCCGCCACCGTACAGCACATTCTCAAAACCCACTTCCCCAACTACCAAAAAGGCGCTAACTTCACCGGTACCCTCTCGGATTTCCTCGGAACAGGAATCTTCAACACCAACGGGGACACCTGGAAGTTCCAGAGGCAAGTAGCCAGCCACGAATTCAACACAAAATCTCTCCGTAAATTCGTCGAACACGTGGTGGACAGCGAGCTCACCAGCCGTCTCATCCCCATCCTCACTTCCGCATCTACAACCAAAAATCAAGTCCTCGATTTCCAAGACATCCTCCAACGATTCGCCTTCGACAACATCTGCAAAATCGCGTTTGGTTTCGACCCAGAATACCTCACACCATCCCTCAATCGGAGCAAATTCGTGCGAGCCTTCGAACAAGCAAATGAAATCAGCAGCAAACGATTCCGCGTGCCGCTACCCATAATCTGGAAGATCAAGAGACAACTCGGAATAGGGTCGGAAAAGCAACTGCGTGAGGCGGTGAGTGAAGTGCGTGAATTCGCGAAGAACATAGTGAGGGAAAAGAAGCAGGAGATGAAGGAAAAAGCGTCGCTAGAATCGCTAAGTTCAGGTCATTCAGACGAAGATTTTGTGACGGATATAGTGATAAGTTTTATATTAGCGGGGAAGGATACGACGTCGTCGGCGCTGACGTGGTTTTTCTGGCTGTTGTGGAAGAATCCGAGGGTAGAGGAAGAGATTGTGAAGGAGATAAGGGAGAAACCGGAAGTTCCGGTATACGATGACGTGAAGGAGATGGTTTACACACACGCGGCGCTGTGTGAGAGTATGAGGCTTTACCCACCTGTGCCGATGGATAGTAAGGAGGCGATGAACGACGACGTTTTACCGGATGGGACGATAGTGAAGAAAGGGATGGTGGTGATGTATCACGTGTACGCAATGGGGAGGATGGAAAGTGTTTGGGGTAGTGATTGGGTCGAGTTTCGGCCCGAAAGGTGGTTAGAGAGGGATGGGTCTGAGTCATCAAAGTGGCGGTTCATTGGGAGGGATTCATTCACGTATCCGGTTTTTCAAGCGGGCCCAAGGATTTGTTTGGGGAAGGAAATGGCATTTTTGCAGATGAAGAGATTGGTGGCTGGCGTTCTGAGCGGCTTCACGGTGGTGCCTTTGCCTCATTTAGCTGAACACCCAAACTTCATTTCCTTCTTGACTTCCCAAATGGAAGGTGGTTTCCCTGTCACCATCCACCCAAGGCTTCCTTCTCCTTCACATTAA 1503 0.4977 MLPYLLPLFFIFPLLFFFFAKKDIAPSSSCSITLPKSYPLIGSYLAIKANAHRRIQWFSDIVRISPPATLTLNHPMGRQQVITANPATVQHILKTHFPNYQKGANFTGTLSDFLGTGIFNTNGDTWKFQRQVASHEFNTKSLRKFVEHVVDSELTSRLIPILTSASTTKNQVLDFQDILQRFAFDNICKIAFGFDPEYLTPSLNRSKFVRAFEQANEISSKRFRVPLPIIWKIKRQLGIGSEKQLREAVSEVREFAKNIVREKKQEMKEKASLESLSSGHSDEDFVTDIVISFILAGKDTTSSALTWFFWLLWKNPRVEEEIVKEIREKPEVPVYDDVKEMVYTHAALCESMRLYPPVPMDSKEAMNDDVLPDGTIVKKGMVVMYHVYAMGRMESVWGSDWVEFRPERWLERDGSESSKWRFIGRDSFTYPVFQAGPRICLGKEMAFLQMKRLVAGVLSGFTVVPLPHLAEHPNFISFLTSQMEGGFPVTIHPRLPSPSH. 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10538 500 CDD CYP86A 75 487 - -
Seca4g10538 500 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10538 500 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10538 500 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10538 500 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10538 500 PRINTS E-class P450 group I signature 345 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10538 500 PANTHER CYTOCHROME P450 24 489 - -
Seca4g10538 500 Pfam Cytochrome P450 36 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10538 500 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10538 500 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10538 500 PRINTS P450 superfamily signature 346 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10538 500 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10538 500 Coils Coil 245 276 - -
Seca4g10538 500 Gene3D Cytochrome P450 16 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10538 500 SUPERFAMILY Cytochrome P450 35 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10538 Seca-Chr4 241305333 241306856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10538 8 494 Cytochrome P450 AT5G63450 47.600 7.17e-155 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10538 K20769 K13407 ag:AAD10204 729.554