Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10522 ATGATTTCTAGCTTTATGATTATCAAAGCCTTAAGATCTTCCTTAATTGAAAAGTCTAGAAAACCCAACAAATTACTACCTCCAGGTCCTAAACCATGGCCTATAGTTGGCAATCTTCCTGAAATGCTTGCAAACAAGCCTGCATTTCGGTGGATTCACAAGCTCATACAAGAAATGAACACTGAAATTGCATGTATCCGCCTAGGAAAAAATGTTCATGTAATCCCTGTCACTTGCCCCATCATTGCCCGTGAATTCTTGAGAAAAAATGATGCTAATTTTGCATCAAGACCAATAAGCATGTCCACTGATATTCTTTCCAGTGGTTACCAAACAACAGCTCTTACACCCTTTGGTGAACAATGGAAGAAAATGAAGAAAGTTATGGTCAATGAATTGCTTTCCCCACTTAAGCATCAATGGCTTCAACATAAAAGGAATGAAGAGGCTAATAACCTTATGTTTTATGTCTACAACAAATGCAAAGATGGAAACTACAATCTTGGCCTTGTGAATGTTAGGACTGTTGCACAACATTATTGTGGTAATGTGTTTAGGAAAATGTTTTTTAATACAAGGTACTTTGGAAAGGGTATGGAGGATGGAGGTCCTGGTTTTGAGGAAACAGAACATGTTGATGCTGCTTTCTCATTGCTTAAGCACATTTATGCTTTCTCTGCTTCTGATTATGTGCCTTGCTTGAGGAGACTTGACTTGGATGGTCATAAGAGAAAGGTGAAGAATGCCATGAGGATCATGGGGAAGTATCATGATTCCATCATTGAAGAAAGAATCAAACAATGGAATGATGGATTGAAGAGTGTTGAAGAGGACTTGCTGGATGTTCTGGTTTCACTCAGAGATGTCAATAATAACCCATTATTGACATTGAAGGAAATCAAGGCTCAAATTATAGAATTGATGATTGAAGTGGTTGACAATCCTTCAAATGCTTTTGAATGGGCACTAGCGGAAATGATAAATCAACCTCAGCTGCTTCAACGAGCCATTGAAGAATTGGACAATGTGGTTGGAAAAGAGAGACTTGTCCAAGAATCAGATATTCCTAAGCTTAACTTTGTGAAGGCATGTGCAAGAGAAGCTTTTCGCCTTCATCCAATGGAGGCCTTCAATATTCCCCATGTATCTATGAACGACACAAACATTGCCAATTACTTCATCCCAAAAGGTAGTCATGTACTCCTAAGCAGAATTGGTCTCGGCAGAAATCCAAAAATCTGGACTGAGCCCCACAAGTTCAAACCAGAACGACATCTCAATGGGTCTGATCATGTAGTTTTGATAGAACCAGATTTGAGATTCATATCATTCAGCACAGGAAGGCGTAGTTGTCCTGGGGTGATGCTTGGCACCACAATGACTATGATGCTATTTGCTAGGTTGCTTCATGGTTTCACTTGGACTGCACCTCCGAACGTTTCAAGCATCAATCTTGCTGAGTCTGATGGTGATTTGTTTCTTGCTACTCCACTTGTTGCAGTTGCAAAGCCAAGATTGTCACCTGAATTGTACCACCTATAG 1542 0.3982 MISSFMIIKALRSSLIEKSRKPNKLLPPGPKPWPIVGNLPEMLANKPAFRWIHKLIQEMNTEIACIRLGKNVHVIPVTCPIIAREFLRKNDANFASRPISMSTDILSSGYQTTALTPFGEQWKKMKKVMVNELLSPLKHQWLQHKRNEEANNLMFYVYNKCKDGNYNLGLVNVRTVAQHYCGNVFRKMFFNTRYFGKGMEDGGPGFEETEHVDAAFSLLKHIYAFSASDYVPCLRRLDLDGHKRKVKNAMRIMGKYHDSIIEERIKQWNDGLKSVEEDLLDVLVSLRDVNNNPLLTLKEIKAQIIELMIEVVDNPSNAFEWALAEMINQPQLLQRAIEELDNVVGKERLVQESDIPKLNFVKACAREAFRLHPMEAFNIPHVSMNDTNIANYFIPKGSHVLLSRIGLGRNPKIWTEPHKFKPERHLNGSDHVVLIEPDLRFISFSTGRRSCPGVMLGTTMTMMLFARLLHGFTWTAPPNVSSINLAESDGDLFLATPLVAVAKPRLSPELYHL. 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10522 513 SUPERFAMILY Cytochrome P450 27 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10522 513 CDD CYP79 61 506 - -
Seca4g10522 513 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10522 513 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10522 513 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10522 513 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10522 513 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10522 513 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10522 513 FunFam Cytochrome P450 9 19 509 - -
Seca4g10522 513 Gene3D Cytochrome P450 19 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10522 513 Pfam Cytochrome P450 27 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10522 513 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 7 512 - -
Seca4g10522 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10522 Seca-Chr4 241131328 241137827 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10522 2 511 Cytochrome P450 AT4G39950 54.475 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10522 - K14984 gmx:100809902 744.191