Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10519 TGGGTTTGGTGTGACAAAACCTTCCCACCCTCACCAACCCATTACCAACCAATCCTTGCTATTCATTTCTCACCAACCACCGCTTCGCTCTTATTCAAAGCCCTCTCAAGGTTTGTGGTATCAAAGACTGCACAAACCATGGGTGGGGAGCGCAAGGTTTTCACTTTGGCTGAAGTCTCTCAGCACAACAATGCCAAAGACTGTTGGCTTGTCATTCATGGCAAGGTTTATAATGTGACAAAGTTCTTAGAGGATCACCCTGGTGGGGATGAGGTCCTGTTGTCTTCCACAGGGAAAGATGCATCTAATGATTTTGACGATATTGGTCACAGCACCAGTGCAGTAGCTATGATGGATGAGTTTTATGTTGGAGACATTGATACATCAACCATTCCTTCTAAGGTTAAGTACACTCCTCCAAAACAACCTCACTATAATCAGGACAAGACACCAGAGTTCATCATCAGGGTGCTCCAATTTCTAATTCCCTTGTTTATCTTGGGTTTGGCAGTTGGTGTTCGTTTCTACACCAAATCATCATAA 543 0.4401 WVWCDKTFPPSPTHYQPILAIHFSPTTASLLFKALSRFVVSKTAQTMGGERKVFTLAEVSQHNNAKDCWLVIHGKVYNVTKFLEDHPGGDEVLLSSTGKDASNDFDDIGHSTSAVAMMDEFYVGDIDTSTIPSKVKYTPPKQPHYNQDKTPEFIIRVLQFLIPLFILGLAVGVRFYTKSS. 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10519 180 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 82 89 IPR018506 GO:0020037
Seca4g10519 180 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 51 127 IPR001199 -
Seca4g10519 180 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 48 137 IPR036400 -
Seca4g10519 180 FunFam Cytochrome b5 type B 48 131 - -
Seca4g10519 180 PRINTS Cytochrome B5 signature 86 100 IPR001199 -
Seca4g10519 180 PRINTS Cytochrome B5 signature 114 126 IPR001199 -
Seca4g10519 180 PRINTS Cytochrome B5 signature 101 108 IPR001199 -
Seca4g10519 180 PRINTS Cytochrome B5 signature 76 86 IPR001199 -
Seca4g10519 180 SMART Cyt_b5_2 54 127 IPR001199 -
Seca4g10519 180 Pfam Cytochrome b5-like Heme/Steroid binding domain 55 126 IPR001199 -
Seca4g10519 180 Gene3D - 44 132 IPR036400 -
Seca4g10519 180 PANTHER CYTOCHROME B5 42 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10519 Seca-Chr4 241088270 241090139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10519 47 179 NADPH P450 reductases AT5G48810 65.926 4.38e-68 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10519 K23490 - gmx:100500611 267.314