Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10513 ATGGACCTGAGGGATGCATGGGCTGGCTTCTTTCTGTTTTGTAGTTTCTGGCTTGTCACTTTCTGTGGACAAGATGGTTTCGTGAGTCTTTCTTGTGGTGGAAGAACCAGTTTCCATGATTCATATAACATTTCATGGCTTCCAGACACCACCTACATAACCAGAGGCAAGACTACAATCATCACATACAATGATGGTTCCTCCTCATTGAATATCTCAGCTCGGTTCTTCCAAAATTCCAGAAGCCGCAGATGTTACAGAATACCAATGAACAATGCAACAACTTTGGTTCTTGTTAGAGCAAAATTTGTGTACAAGAACTATGATGGACTTGGGAAACCCCCTAGATTTTCTGTTTCTATTGGGACAGCTATTGCTGCTACAATAAATCTTGCTGAACATGATCCATGGAATGAAGAATTACTATGGACAGTGAATAAGGATACACTTCCATTCTGTTTAATTTCAATTCCAAAAGGTGGTTCACCTGTAATTTCTTCCCTTGAAATCAGACCACTTCCTCAAGGAGCCTACACAAGTGGCATTGAAGATTTTCCAAATAAGCTGCTAAGGAAGACTTATCGAATTGATTGTGGATACACCAATGATTCTATCCGGTATCCCTTGGATCCATTTGATAGAATATGGGATGCTGATAGAAACTTCACACCCCTTCATGTTGCAATTGGGTTTAAGAGTCAGCATAGCTTTAATCAATTAAGTCTTTTGGAGGAACCACCAGCAGCTGTTATTCAAACTGGGAGAGTTTTGGCAAGACGAAATATGCTGACATATAACCTCCCTCTTAGCACATTAGGGGACTACTACATCATCCTCTACTTTGCTGGAATTCTTCCTGTCTTCCCCTCATTTGATGTTTTAATAAATGGAGATCTAGTAAAATCAACCTACACAATAAAAAACTCAGAAATCAGTGTTTTATATGTTACACAAAAGGGAATCAGCAGCTTGAATATAACACTGAAGAGGATAAGCTTTTACCCTCTGATCAATGCATTTGAGGTATATAAGATGGTTGATATTCCATCTGATGCCTCCTCAACCACAGTTTCAGCACTGCAGGTTATTCAACAGTCCACAGGATTGGATCTTGGATGGCAAGATGATCCATGCTCTCCTTCACCCTGGGATAGAATTGATTGTGAAGGAAACCTTGTTACATCATTGGATCTTTCAGACATAAACTTGAGATCAATTAATCCTGCATTTGCTGACTTGTTAGACCTTAAAACATTGGATTTGCACAACACATCGCTTTCAGGTGAAATACAGAATTTGGATAGCTTGCAACATCTTGAGAAACTGAACATGAGTTTCAATCACTTAACATCCTTTGGTGTAGATCTTGATAGCTTGATTAGCCTTCAAATATTAGACTTGCAGAATAATAGTCTACTGGGAATAGTGCCTGATAGCTTGGGAGAGTTAGAGGACCTCCACTTACTGAATCTGGAAAACAACAAACTACAAGGTCCACTACCACAGTCTTTGAAGAAAGAAACTTTAGAGATCAGAGCATCTGGGAATTTGTGCCTTACCTTTTCCACAACCAAATGTGATGATGCATCATCCAATCATTCAATTGAGACACCCCAAGTTACTTTGGTTCCTAAGAAGAAGCACAATGTACTTAACCATCTAGCAATAGTTCTAGGCATTGGAGGAGCCACAGTAGCCTTTCTCTTAATGTGTGTTTCAGTATTTATATACAAGACTAAACAGAAATATAAAGTCTCACAGACAACAAGAGAAGAAATGGATATGAGGAATTGGGGTGCAGCAAAAGTCTTTTCCTACAAAGAAATCAAATTAGCTACAAGAAACTTCAAAGAAGTTATAGGAAGGGGAAGTTTTGGATCTGTTTATCTTGGAAAACTTCCAGATGGAAAATCAGTAGCTATCAAAGTTCGGTTTGATAAATCCCAACTTGGTGCTGATTCTTTTATTAATGAGGTTAATCTTTTGTCAAAAATCCGGCATCAAAATCTTGTGTCTTTGGAAGGATTTTGTCATGAATCAAAACATCAGATATTAGTTTATGAGTACTTACCTGGTGGACCCCTGGCTGATCATCTCTATGGTACAATCAGTCAAAAAACTTCCTTAAGCTGGGTTCGGAGGTTGAAAATTGCTGTTGATGCAGCAAAAGGTACAACATTAAGTTCTTAA 2190 0.3854 MDLRDAWAGFFLFCSFWLVTFCGQDGFVSLSCGGRTSFHDSYNISWLPDTTYITRGKTTIITYNDGSSSLNISARFFQNSRSRRCYRIPMNNATTLVLVRAKFVYKNYDGLGKPPRFSVSIGTAIAATINLAEHDPWNEELLWTVNKDTLPFCLISIPKGGSPVISSLEIRPLPQGAYTSGIEDFPNKLLRKTYRIDCGYTNDSIRYPLDPFDRIWDADRNFTPLHVAIGFKSQHSFNQLSLLEEPPAAVIQTGRVLARRNMLTYNLPLSTLGDYYIILYFAGILPVFPSFDVLINGDLVKSTYTIKNSEISVLYVTQKGISSLNITLKRISFYPLINAFEVYKMVDIPSDASSTTVSALQVIQQSTGLDLGWQDDPCSPSPWDRIDCEGNLVTSLDLSDINLRSINPAFADLLDLKTLDLHNTSLSGEIQNLDSLQHLEKLNMSFNHLTSFGVDLDSLISLQILDLQNNSLLGIVPDSLGELEDLHLLNLENNKLQGPLPQSLKKETLEIRASGNLCLTFSTTKCDDASSNHSIETPQVTLVPKKKHNVLNHLAIVLGIGGATVAFLLMCVSVFIYKTKQKYKVSQTTREEMDMRNWGAAKVFSYKEIKLATRNFKEVIGRGSFGSVYLGKLPDGKSVAIKVRFDKSQLGADSFINEVNLLSKIRHQNLVSLEGFCHESKHQILVYEYLPGGPLADHLYGTISQKTSLSWVRRLKIAVDAAKGTTLSS. 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10513 729 PANTHER OS07G0107800 PROTEIN-RELATED 28 450 - -
Seca4g10513 729 ProSiteProfiles Protein kinase domain profile. 614 729 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca4g10513 729 Pfam Malectin-like domain 30 345 IPR024788 -
Seca4g10513 729 Gene3D - 191 346 - -
Seca4g10513 729 SUPERFAMILY L domain-like 358 506 - -
Seca4g10513 729 FunFam serine/threonine-protein kinase PBS1-like 580 689 - -
Seca4g10513 729 Gene3D Transferase(Phosphotransferase) domain 1 594 726 - -
Seca4g10513 729 SUPERFAMILY Protein kinase-like (PK-like) 586 724 IPR011009 -
Seca4g10513 729 ProSitePatterns Protein kinases ATP-binding region signature. 620 642 IPR017441 GO:0005524
Seca4g10513 729 Gene3D Ribonuclease Inhibitor 356 528 IPR032675 -
Seca4g10513 729 Pfam Protein tyrosine and serine/threonine kinase 616 725 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10513 Seca-Chr4 241034673 241039078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10513 10 724 Receptor kinase-like Gene Family AT5G48740 58.240 0.0 812
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Seca4g10513 Malectin_like 1.7e-50 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10513 - - aprc:113850446 1215.68