Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10488 ATGCTAAAGCAGGAACTTTACTTCCTACCTTTTGGAGGTGGAAGTAGGCTCTGTCCTGGAAGTGACTTGACAAAAGTTGAAATTTCCGTATTGTTACGTCACTTCCTCCTTAATTATAACAATGATGATCGTGCAATTCTACTGCAGTCTTTTTTTAATTATTATTATTTATTTTTTAATTTATTAACTAAATATATTATTACATTCATGATTTTTTTACATATAATTAACCGCACAAAATCAATTAACCAAATATTTCATTTTGTTAATCATCAATGTATATATCATTAA 291 0.2715 MLKQELYFLPFGGGSRLCPGSDLTKVEISVLLRHFLLNYNNDDRAILLQSFFNYYYLFFNLLTKYIITFMIFLHIINRTKSINQIFHFVNHQCIYH. 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10488 96 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 11 20 IPR017972 GO:0005506|GO:0016705
Seca4g10488 96 SUPERFAMILY Cytochrome P450 7 41 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10488 96 Pfam Cytochrome P450 3 40 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10488 96 Gene3D Cytochrome P450 2 52 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10488 Seca-Chr4 240738474 240738764 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10488 8 39 Cytochrome P450 AT1G05160 71.875 1.52e-11 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10488 K04123 - sind:105173422 63.1586