Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10486 ATGGAACTACACTTGCTCTTGGTGTGTGCTGCCACTTTGTTGGCATGCTACATTTTCGTAGTCAAATTTCTGAGGAGATTGAATGGGTGGTATTATGATCTCAAACTAAAAAATAAGCAATACCCTCTTCCTCCTGGTGATATGGGATGGCCTCTTATTGGCAATCTTTTAGCCTTCATGAAAGATTTCTCATCTGCTCACCCTAATTCATTCATCAACAACCTTATTCTCAAGTATGGACAATGTGGTATTTACAAGACTCACTTGTTTGGAAATCCAAGCATCATAGTTTGTGAGCCTCAAATGTGTAAACGAGTGCTAACAGATGATGTGAACTTTAAGCTTGGCTATCCAAAATCCACCAAACAGTTAGCACGATGTAGACCCATGTATGATGTCTCTAGTGCAGAACATAGGCGTTTTCGACACCTAATCATTGCTCCTATTGTGGGTCACAATGCATTAGCAATGTACCTAGAATGTATTGAGGATATCATGGTCAATTCGTTAGATGAATTATCAAGCATGACACACCCCGTTGAGTTTTTGAAAGAGATGAAAAAGATTTCCTTTAAAGTTATCATTCATGTTTTTATGGGGCGCTCTTACAATGAAAACATCGGTTCCAAAATAGGAAGTTCGTTTACCGATATGTATAGTGGCATATTCTCTATCCCCATTAATGCTCCCGGTTTTACTTTCCACAAAGCACTCAAGGCACGTCAGAAGTTGGTCAAGTTAGTTCAACCTGTTGTGGATGAAAGGAGGTTGATGATAAAAAATGGTCAAGTGGGAGAAAAGAAAGATCTTGTTGATATTCTTTTGGAAATCAATGATGAGAATGGTCAGAAATTGGAGGATGAGGATATTATTGACTTATTGATTGGGGCTTTATTTGCTGGTCATGAAAGCACAGCAACTGCTTTGATGTGGTCAATTATATATCTTACACAACATCCATATTTCTTGAAAAAAGCCAAGGAAGAACAAGAAGAAATCATGAAGAGAAGACTACCCTCACAAAAACAATTAACTCTTAAGGAAATTAAGCAAATGATTTATCTTTCTCAAGTGATCGATGAAACGTTGCGTTGTGCCAACATTGCCTTTTCAACTTTTCGAGAGGCAACTACCGACATGAACATCAATGGTTATATCATACCAAAAGGATGGAGAGTGATAGTTTGGTTAAGAGTTATTCATATGGATCCTGAATATTACACAAATCCAGAAGAATTTAATCCATCTAGATGGGATGATTACAATGACAAACCAAAAACCTTCCTTCCTTTTGGAGCAGGAAGTAGGCTCTGTCCCGGAAGTGACTTAGCGAAACTTGAAATTTTTGTATTTCTACATTATTTCCTCCTTAATTACAAGTTGGAGCAAATAAATCCAGAATGTCCGATTACTAGCTTGCCATCACCAAAGTTCATAGACAATTGCCTCGCTAAGGTGGTGAAGATCTCGTGTGCCTAG 1479 0.38 MELHLLLVCAATLLACYIFVVKFLRRLNGWYYDLKLKNKQYPLPPGDMGWPLIGNLLAFMKDFSSAHPNSFINNLILKYGQCGIYKTHLFGNPSIIVCEPQMCKRVLTDDVNFKLGYPKSTKQLARCRPMYDVSSAEHRRFRHLIIAPIVGHNALAMYLECIEDIMVNSLDELSSMTHPVEFLKEMKKISFKVIIHVFMGRSYNENIGSKIGSSFTDMYSGIFSIPINAPGFTFHKALKARQKLVKLVQPVVDERRLMIKNGQVGEKKDLVDILLEINDENGQKLEDEDIIDLLIGALFAGHESTATALMWSIIYLTQHPYFLKKAKEEQEEIMKRRLPSQKQLTLKEIKQMIYLSQVIDETLRCANIAFSTFREATTDMNINGYIIPKGWRVIVWLRVIHMDPEYYTNPEEFNPSRWDDYNDKPKTFLPFGAGSRLCPGSDLAKLEIFVFLHYFLLNYKLEQINPECPITSLPSPKFIDNCLAKVVKISCA. 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10486 492 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10486 492 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10486 492 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10486 492 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10486 492 CDD CYP90-like 76 486 - -
Seca4g10486 492 SUPERFAMILY Cytochrome P450 39 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10486 492 PANTHER CYTOCHROME P450 26 39 469 - -
Seca4g10486 492 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10486 492 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10486 492 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10486 492 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10486 492 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10486 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Seca4g10486 492 Gene3D Cytochrome P450 34 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g10486 492 Pfam Cytochrome P450 44 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10486 Seca-Chr4 240542410 240545744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10486 6 488 Cytochrome P450 AT2G32440 47.727 6.21e-173 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10486 K04123 K17875 ag:BAG68929 799.66