Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10471 ATGGAGTTAAATAGTGATGATTCGACCGTTAATCTGGATGATGATAAAGACTTTAGTTATAGTGATTCTTCTAACTCTAGCGATGATGAAAATCATAATCAAAATGATAGAGTTATTGATTTTGAGGATGAAGTTAATGAAGAAGAGGTAGACACTGATGAGGGAAATGAAGCTATGGATGCAGAAGTTGGAGGGGAGGTGTCAAGGAGGATCATTGATTTGACAAGTGATGATATATGGGCATTGGAATTCTGTAGTGAAAATGATGCGTTCAATTTTTACTTTTCTTATGCAAGATGTCATGGATTTGCTGTGAGGAGGGATGATGTAATTAAAGACAGTAAAGGTATGCTCATAATGCGACAGTTCTTATGTAGTAGGGCTGGTTTTAGGGACAAAAAGCATTTGATTAGGTTAGATCGGAAAAAGGAACATAGGCCTCTTACTCGAACAAATTGTCAAGCTAAGTTGAGGGTTCGGTTTGATTATAAGATTGGGAAATTTAAGGTTGTTTCCTTTTTAGTCTCTCATAACCATGAATTGACCCCTGCTAAATTTGTACCTTTAATGCCTGTATATCGTGGTTTGAGTGATGGGGACAAAGCCCAAGTTGATGCATTGCATTCTCATGGTGTTAGACCTTGTCAGATAATGGGTTTTCTTGTTGATAAAAAATGA 678 0.3673 MELNSDDSTVNLDDDKDFSYSDSSNSSDDENHNQNDRVIDFEDEVNEEEVDTDEGNEAMDAEVGGEVSRRIIDLTSDDIWALEFCSENDAFNFYFSYARCHGFAVRRDDVIKDSKGMLIMRQFLCSRAGFRDKKHLIRLDRKKEHRPLTRTNCQAKLRVRFDYKIGKFKVVSFLVSHNHELTPAKFVPLMPVYRGLSDGDKAQVDALHSHGVRPCQIMGFLVDKK. 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10471 225 MobiDBLite consensus disorder prediction 41 56 - -
Seca4g10471 225 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 21 222 - -
Seca4g10471 225 MobiDBLite consensus disorder prediction 9 40 - -
Seca4g10471 225 MobiDBLite consensus disorder prediction 1 56 - -
Seca4g10471 225 Pfam FAR1 DNA-binding domain 92 182 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10471 Seca-Chr4 240409147 240409824 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g10471 FAR1 2.2e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10471 - - ccaj:109794460 206.068