Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10468 ATGGCTTTCTCTGCTCCTAAATTCTACATCATGTTTCTGCTCCTCTGCCTTGCCCTCCTCCTTTTCTCCACATGGGAGGTAGAAGCAAATGTTTGTCGAAGGCGTAGCCAAACATGGTCAGGGCCTTGTTTGAACACAAGGGGCTGTAATGATCAGTGCATCAGAGTGGAACAAGCAGTTTCTGGCGCCTGTCACCCTGATGGCTTTGGTGTGGCTTGCTTCTGCTTCTTCAATTGCTGA 240 0.4917 MAFSAPKFYIMFLLLCLALLLFSTWEVEANVCRRRSQTWSGPCLNTRGCNDQCIRVEQAVSGACHPDGFGVACFCFFNC. 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10468 79 PANTHER DEFENSIN-LIKE PROTEIN 1 1 76 - -
Seca4g10468 79 SUPERFAMILY Scorpion toxin-like 30 79 IPR036574 -
Seca4g10468 79 Gene3D - 31 79 IPR036574 -
Seca4g10468 79 Pfam Gamma-thionin family 31 79 - -
Seca4g10468 79 SMART gth_4 31 79 IPR003614 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10468 Seca-Chr4 240361149 240367234 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10468 9 79 Plant Defensins Gene Families AT1G19610 52.703 1.01e-22 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10468 - - lja:Lj3g3v0720000.1 116.701