Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10466 ATGGCTTTCTCTGCTCCTAAATTCTACACCATGTTTATGTTCCTCTGCTTTGCCTTCCTCCTTTTCTCCACATGGGAGGTGCAAGCAAATCTTTGTCAAAGGAAAAGCAAAACATGGTCAGGGTCTTGTTTAAACACAGGAGGCTGTAAAAATCAGTGTATCAACGTGGAACATGCAGTTTTCGGAGCTTGTCATGATCTTACTTGCTTCTGCTACTTCAATTGCTGA 228 0.4211 MAFSAPKFYTMFMFLCFAFLLFSTWEVQANLCQRKSKTWSGSCLNTGGCKNQCINVEHAVFGACHDLTCFCYFNC. 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10466 75 PANTHER DEFENSIN-LIKE PROTEIN 1 1 72 - -
Seca4g10466 75 Gene3D - 31 75 IPR036574 -
Seca4g10466 75 Pfam Gamma-thionin family 31 75 - -
Seca4g10466 75 SUPERFAMILY Scorpion toxin-like 31 75 IPR036574 -
Seca4g10466 75 SMART gth_4 31 75 IPR003614 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10466 Seca-Chr4 240350794 240351372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10466 9 75 Plant Defensins Gene Families AT1G19610 47.297 2.16e-18 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10466 - - mtr:25500300 108.997