Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca4g10453 | ATGGATCCTGCTTCTTATGTTCAAACTATTGCAGGAATCTTAGCCCTCTTGGTTCTATACATTGTGTTTAGATCCATTAGATCATCTAATGGACCTAAAGAATATAAAAGCAGCACCAATTACAACAAAGTACCCGAACCATGTGGTGCATTACCCATTATAGGCCATCTCCATCTTCTCAGCGCTAGTAAGCCATATTTCAGGACCTTTTCAGCTATGGCCCAGAAATATGGCCCAATATTCTCCCTCAGGCTCGGTTGCCACCGCACCATAGTGGTGAACAACAGGGAAATTGCCAAGGAATTTCTCATAACACATGACAAAGTTTTTGCCTCAAGGGCTAGCATAGCTGCTGGGAGATACATTGGTTACAACAATGCCATTTTTGGTCTTGCCCCTTATGGAAATTATTGGCGTGAAATGAGGAAAATTTCTACCCTTGAGCTTTTATCAAGTCATAGGCTTGAAAAGCTAAAGCATGTGAGGGAAACAGAGATATATTCTCTTGTCAAGGACTTGTACTCATATGCAAAGAATTTGATGAATGATTCAATTCAAGTGCCTATGAGCAAGTTATTAGAGCACATGACTTTCAACATAGTTGTGAGGATGATAGCTGGGAAGAGATTTAGAAGTGAAACTATCAATGAAGAGAATAGTGAGGGATGGAGACTAAGGAGGGCAATTAAAGATACTACTTATCTTAGTGGTGTTTTTGTGGCGGCTGATGCTATTCCTTACCTTAGTTGGTTTGATTTCCAAGGTCATGTGGGTTTCATGAAAAGGACAGCTAAGGAAATTGACTTCATTCTTGATAAGTGGATGCATGAACACTTGAGAAAGAGAGAGAATGATGGATGTGAAGATGATTTCATGGATGTGTTGATATCAATGTTCGATGGGCAAGAAATGATTTGTGGCCACAAGCGAGAGATTGTTATTAAAGCAACAGCACTGATGCTTATCCTTACGGCTTCAGGAAGCACAGCTATGACATTAACATGGGCACTTTCGTTGCTCCTAAACCATCCAAAGGTTCTAAAGGCAGCTCAACAAGAGCTTGACACCAACGTAGGAAAAGACAAATGGGTTCAGGAATGTGACATCAAAGACCTCAATTATCTACAAGCCATTGTCAAAGAGACCCTTCGTCTATACCCACCAGCACCCTTAACAGGAATAAGGGAGGCCATAGATGATTGCCACGTGGCAGGCTATTATGTCCCAAAAGGCACCCGTTTGCTAATTAACCTTTGGAAGCTGCAAAGGGACCCACAGATTTGGTCCAACCCTGATGAGTTCCAACCTGAGAGGTTCCTCACATCTCAAGTGGACATTGATTTTCAGAGTAAAAACTTTGAGTTAATCCCATTTGGGTATGGAAGAAGGTCATGTGCTGGCATGACATTTGGGCTGCAAGTGGTGCATTTGACTTTGGCTCGGTTGCTTCAAGGCTTTGATATATACACTAAAGAAGGTGTTCCTGTTGATATGAGTGAAGGATTAGAACTAACAATCATAGTATTAACTATAGCTCTAGTGCTTCTCTACAACACATGGAGGATGAAAAGAAAATCCAATCACAAAATTCTACAAGCACCAGAAGTATCAGGTGGGTTACCTTTGATAGGTCACCTCCACCTACTAGGAAACCAAACACCCCTTGCAAGAACCTTTGCTTCATTGGGTGACAAATATGGCCCTATCTTCCAAATCCGTTTAGGAGCATACCCTGCTCTTGTGATTTCCAACCAAGAAGCAATCAAAGAATGTTTCACCACAAAGGACAAAATCCTAGCCTCACGCCCAAAATCAAGCCATGGAATCCACCTTGGTTATAACTATGCAGGTTTTGGATTTGCCCCTTATGGCTCTTATTGGACCAAGTTGAGAAAACTAACCATGCTTGAATTACTCTCTTCTCGCCGCCTTGAATCATTGAGACATGTTTATGAAACAGAGATTGATACTTTGATCAATGATCTCTCCTTGTATCTTAGAGGTAATAATATCTCTAAGGTTGTGATTATAAGTGAATGGTTGGAACGGTTAACCTTCAATATAATCACAAAGATGATTGCAGGGAAGAGGTATTTCAAGTATTTGCAAGATGTGGATGATGTAGAAGCACATGGTATTGTGAAACTTATTAAAGAATTTATGCATATTTCTGGGGAGTTTGTTCCCTCGGATTTGATTCCTGTTCTTGGGTGGTTTGGTTTTCATGGTCATGTGTTGAAATCTATGAAACGAATTGCGAAAGATTTGGACACACTTGTGGGAAGTTGGGTTGAAGAGCATAAGAGTATTGATGGTGAGAAGGATTCAAGGGAGGAACGTGATTTCATTGATGTGATGCTGTCTGTGATTGAAGATGATCCTGCTTCTGGTCATACCCGTGATACCATCATCAAGGCAAATAGTATGAATCTGATGTTAGCTGGGTCAGACACAACATCGACAACAATGACATGGATCCTAGCCATATTGTTGAACAACAAGCATGCTTTGAAGCGTGCACAAGAGGAGATTGACCATCACGTGGGTAGGGACAGAAGGGTGGAAGCATCCGACATAAAAAACCTTGTTTTTCTTCAAGCCATTGTCAAGGAAACTTTGAGGTTATACCCTCCAGGGCCACTCTTGGTGCCCCACGAGGCAAGAGAAGATTGCTACATTCATGGCTATTATGTGCCTAAAGGGACCCGTGTGTTTGCCAATGTGTGGAAACTACATAGAGACCCAAGTCTTTGGTCAGAGCCTGAGAAATTTTCACCCGAGAGGTTTATCAATGACATTGGAGAACTTGATGAAGGTCACCATTTTGAGTACCTTCCTTTTGGATCAGGGAGAAGAGCTTGCCCTGGATCTACGTTTGCTACACAAGTGAGTCTCATCACACTTGCTCGTTTGCTTCAAGGATTTGATTTGGATGTGCCAGTGGATGAACCTGTTGATATGAGAGAAGGCTTGGGCATAACCTTGCCCAAATTAACTCCATTACAAATTATTATGACCCCACGACTATCCTATGAACTCTATCATCGCACATAG | 3054 | 0.4165 | MDPASYVQTIAGILALLVLYIVFRSIRSSNGPKEYKSSTNYNKVPEPCGALPIIGHLHLLSASKPYFRTFSAMAQKYGPIFSLRLGCHRTIVVNNREIAKEFLITHDKVFASRASIAAGRYIGYNNAIFGLAPYGNYWREMRKISTLELLSSHRLEKLKHVRETEIYSLVKDLYSYAKNLMNDSIQVPMSKLLEHMTFNIVVRMIAGKRFRSETINEENSEGWRLRRAIKDTTYLSGVFVAADAIPYLSWFDFQGHVGFMKRTAKEIDFILDKWMHEHLRKRENDGCEDDFMDVLISMFDGQEMICGHKREIVIKATALMLILTASGSTAMTLTWALSLLLNHPKVLKAAQQELDTNVGKDKWVQECDIKDLNYLQAIVKETLRLYPPAPLTGIREAIDDCHVAGYYVPKGTRLLINLWKLQRDPQIWSNPDEFQPERFLTSQVDIDFQSKNFELIPFGYGRRSCAGMTFGLQVVHLTLARLLQGFDIYTKEGVPVDMSEGLELTIIVLTIALVLLYNTWRMKRKSNHKILQAPEVSGGLPLIGHLHLLGNQTPLARTFASLGDKYGPIFQIRLGAYPALVISNQEAIKECFTTKDKILASRPKSSHGIHLGYNYAGFGFAPYGSYWTKLRKLTMLELLSSRRLESLRHVYETEIDTLINDLSLYLRGNNISKVVIISEWLERLTFNIITKMIAGKRYFKYLQDVDDVEAHGIVKLIKEFMHISGEFVPSDLIPVLGWFGFHGHVLKSMKRIAKDLDTLVGSWVEEHKSIDGEKDSREERDFIDVMLSVIEDDPASGHTRDTIIKANSMNLMLAGSDTTSTTMTWILAILLNNKHALKRAQEEIDHHVGRDRRVEASDIKNLVFLQAIVKETLRLYPPGPLLVPHEAREDCYIHGYYVPKGTRVFANVWKLHRDPSLWSEPEKFSPERFINDIGELDEGHHFEYLPFGSGRRACPGSTFATQVSLITLARLLQGFDLDVPVDEPVDMREGLGITLPKLTPLQIIMTPRLSYELYHRT. | 1018 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca4g10453 | 1017 | FunFam | Cytochrome P450 82C4 | 34 | 516 | - | - | |
| Seca4g10453 | 1017 | SUPERFAMILY | Cytochrome P450 | 539 | 1008 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Seca4g10453 | 1017 | PANTHER | CYTOCHROME P450 82C3-RELATED | 510 | 1014 | - | - | |
| Seca4g10453 | 1017 | FunFam | Cytochrome P450 82C4 | 523 | 1006 | - | - | |
| Seca4g10453 | 1017 | Pfam | Cytochrome P450 | 46 | 503 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Seca4g10453 | 1017 | Pfam | Cytochrome P450 | 537 | 998 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Seca4g10453 | 1017 | PRINTS | P450 superfamily signature | 814 | 831 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Seca4g10453 | 1017 | PRINTS | P450 superfamily signature | 867 | 878 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Seca4g10453 | 1017 | PRINTS | P450 superfamily signature | 945 | 954 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Seca4g10453 | 1017 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 458 | 467 | IPR017972 | GO:0005506|GO:0016705 | |
| Seca4g10453 | 1017 | CDD | CYP82 | 78 | 516 | - | - | |
| Seca4g10453 | 1017 | Gene3D | Cytochrome P450 | 522 | 1012 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Seca4g10453 | 1017 | Gene3D | Cytochrome P450 | 34 | 512 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Seca4g10453 | 1017 | PRINTS | E-class P450 group I signature | 98 | 119 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Seca4g10453 | 1017 | PRINTS | E-class P450 group I signature | 196 | 214 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Seca4g10453 | 1017 | PRINTS | E-class P450 group I signature | 333 | 359 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Seca4g10453 | 1017 | PRINTS | E-class P450 group I signature | 954 | 977 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Seca4g10453 | 1017 | PRINTS | E-class P450 group I signature | 944 | 954 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Seca4g10453 | 1017 | PRINTS | E-class P450 group I signature | 74 | 93 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Seca4g10453 | 1017 | PRINTS | E-class P450 group I signature | 907 | 931 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Seca4g10453 | 1017 | PRINTS | E-class P450 group I signature | 866 | 884 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Seca4g10453 | 1017 | SUPERFAMILY | Cytochrome P450 | 45 | 508 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Seca4g10453 | 1017 | CDD | CYP82 | 567 | 1008 | - | - | |
| Seca4g10453 | 1017 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 947 | 956 | IPR017972 | GO:0005506|GO:0016705 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Seca4g10453 | Seca-Chr4 | 240230404 | 240238414 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Seca4g10453 | 44 | 516 | Cytochrome P450 | AT4G31940 | 49.068 | 1.01e-154 | 466 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Seca4g10453 | - | K17961 | gmx:100790675 | 803.512 |