Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10419 ATGAAGGCAATTCCTATTTTTGTCGTCTTCCTTCTTGCTTCGGCATTAGTTTCTGCGAAGAAAACCGGTGATGTAAAGGAGTTGCAGATTGGCGTGAAGCATAAACCAGCATCATGTGAAGTTCAGGCACACAAAGGTGACAGAGTCAAAGTACACTATCGGGGAAAACTCACTGATGGAACCGTTTTCGATTCTAGCTTTGAAAGAAACAATCCAATTGAATTTGAGCTTGGTAGTGGTCAAGTAATAAAAGGGTGGGACCAAGGATTATTGGGAATGTGTCTGGGTGAGAAGCGGAAGCTGAAAATACCAGCAAAACTTGGCTATGGAGAGCAAGGTTCCCCACCCACTATTCCAGGTGGTGCAACACTTATATTTGACACTGAGCTTGTGGGAGTGAACGATAAAAGTTTAAGCGAAGAAAAACCAAACTCCGAACTGTAG 444 0.4324 MKAIPIFVVFLLASALVSAKKTGDVKELQIGVKHKPASCEVQAHKGDRVKVHYRGKLTDGTVFDSSFERNNPIEFELGSGQVIKGWDQGLLGMCLGEKRKLKIPAKLGYGEQGSPPTIPGGATLIFDTELVGVNDKSLSEEKPNSEL. 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10419 147 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 40 131 IPR001179 GO:0003755
Seca4g10419 147 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 46 134 IPR001179 GO:0003755
Seca4g10419 147 PANTHER PEPTIDYLPROLYL ISOMERASE 8 136 IPR044609 GO:0000413|GO:0003755|GO:0061077
Seca4g10419 147 FunFam Peptidylprolyl isomerase 14 134 - -
Seca4g10419 147 Gene3D - 14 134 IPR046357 GO:0003755
Seca4g10419 147 SUPERFAMILY FKBP-like 28 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10419 Seca-Chr4 239838268 239843025 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10419 47 140 Calmodulin-binding Proteins AT3G25230 33.333 4.32e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10419 K09569 - gmx:100305479 271.552