Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10394 ATGTCCAAAGTTGCAGTTTCATTCACTCACATCATCAAGAGTGGAGACCCTGCTTTCAGTGTCTTGGTATCAAGGTTCTTGCTTGGTAAAGCATTCCCCATGTCGGTTTACATGTCACTTGTGCCAATTATTGGTGGTTGTGCACTAGCTGCTGTGACAGAGCTCAAATTCAATATGATTGGCTTTATGGGAGCTATGATATCAAATTTGGCATTCGCTAAGGATATGCATTTTATCAAAGAAAATGTCTTATTTGTACAAATAATAACACATAATCAACATTAA 285 0.3754 MSKVAVSFTHIIKSGDPAFSVLVSRFLLGKAFPMSVYMSLVPIIGGCALAAVTELKFNMIGFMGAMISNLAFAKDMHFIKENVLFVQIITHNQH. 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10394 94 PANTHER SOLUTE CARRIER FAMILY 35 4 82 - -
Seca4g10394 94 Pfam Triose-phosphate Transporter family 1 76 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10394 Seca-Chr4 239491027 239491449 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10394 1 72 Antiporters AT5G54800 86.111 4.23e-39 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10394 K15283 K05350 gmx:100790658 132.494