Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10371 ATGGCTGAGCAAATTCCCTATTGTGTTGCTTCAAGCCTTATTGTCAGGTTGTCTTCTGCAGCCTTTCGTGAACTTGGCCGTATTTATGGTGTCATGGATGAGTTGAAAAGGCTTAAGGATACAGTTGAATCCATTAAAGCTGTGCTCCTTGATGCTGAGGAGAGACAAGAACGAGATCACTCTGTGAAGATCTGGATAAGAAGGCTCAAAGATGTGCTTCACCCTGCAGATGACTTGCTAGATGAATTTGCCATTCATGAAATGACACACAACATGGATTCAGGTCATAAGAACAAAGTGAAAGAGGTATTTCATTCCTTATCTCTTAACCGAATAGTTTTTCGCCATGATATGGCTCATAAAATTGAAAAAATACGAAGAAATTTCAATGATGTAGTGCAAGAAATGTCTCAGTTGAACTTAAGCCCAAGAGCTGGGGTGGTTAAACAAACTGACAGTGTAAGGAGGGAGACTAGTTCATTTGTGTTAGAATCAGATATCATTGGAAGAGAAAATAGTAAAAAGGAGATCATAAGTTTTTTGAGGCAAACACATACAAATCAAAATGTTTCTGTGATTGCTATTGTTGGTATTGGTGGTTTAGGCAAGACAGCTCTTGCTCAATTGGTTTATAATGATGTGGAAGTGCAAAACTTTTTTGAAAAGCGAATGTGGGTATGTGTCTCTGACAACTTTGATGTCAAAACTATTGTGAGGAATATGTTGGAGTCATTAATCGGTAGCAAAATTGACGATAAGTTATCATTAGACAACTTGCAAAATGTGCTTCGTGAAAATTTGATTGGCAAAAGATATATGTTAGTTCTGGATGACATTTGGAATGAGAGTCTTGAAAAATGGGCTCAATTGAGAACTTACTTGATGTGTGGTGCTCAAGGTAGTAAGGTTTTGGTGACAACCCGTAGTAAGACCGTGGCACAGACAATGGGTATAAGTGACCCTTTTGTTTTGAATGGTTTGACTTCAGAAGAATCTTGGAGCTTGTTAAAGAAAATTACATTTGGGGATGATACGAGGAGAGTGAATCAAACTTTAGAATCAACTGGTAAGAAGATAGCAGAAAAGTGTAAAGGTGTTCCATTAGCAATTAGAACGCTAGGAGGCGTATTGCAGAGTAAAAGTGAAGAAAGTGAATGGATTGGTGTTTTACAAGGTGACTTTTGGAAATTATGTGAAGAGGAGGATAGTATCATGCCAGTTTTAAAACTCAGTTATCAAAACTTGACACCTCAACAGAAACAATGTTTTGCGTATTGTTCTCTATATCCTAAGGATTGGAAAATTATGAAAGATGAGTTGATTCAACAGTGGATGGCACAAGGTTATCTTGAATGTTCAACTGAAGAGGAGCAGCTCATGGAAGATGTCGGTAACCAAATTGTGAAGGTCTTCTTGATGAAGTCAATTTTTCAAGATGCCAAAATGAAAGAACATGGTGTCATAATGTGTTTCAAGATGCATGATCTAATGCATGATCTTGCGATGCATGTAGCTGGCAATGACTGTTGTTACTTGGATAGTGAGGCAAAAAGACTTGTGGGAAGACCCATGCATGTATGGTTGGACAATAATGATAATGCCTTTCGTTTGTTGGGCTCATTGGATGCAAACAGGCTTCGAACTTTGATTTTGCTGTCTTCATCTTTAAAGAATTTAAAAAAGGAGGAATTATTTGTTATTTCAAAATTCAAATACTTGCGTGTCTTGAAGTTGTCACATCTTTCTTTAGGTGACTTGTCTGCTGTAATTGGAAAGATGAAGCATTTAAGATATCTTTACATAGATTTCTGTGACAAACTAGTTGGTCTTCCTGAATCCATAAGCAATCTTGTTTGCTTACAAACATGGAAATGGGTGACATGTGAGAAAGAAATTGAATTTTCTACAAAAGTGTTCTCAAAATTAATCAATTTGAGACACCTTGACATCGAATGTTGGAAAGCCTCTAATGAGAAGATGCCAATTGGATTTGGAAGACTGAGAGCGCATTGGTGGCATGAGAGTGTGATATATTCAAACTGGATTTCTTCACTCACAAATATTGTTGAAATCTCTCTCTACATGTGTCGAAGTTTACGGTATCTCCCTCCATTGGAACGTCTCCCATTCCTTAAGTCACTTGGTATATCTTACCTTTATGATATGGAGTACATATATTATGAAGAGTGTTTCCCTAGAACATTCTTCCCATCTTTGGAGAGACTCAGAATTTTCTCTTGCAAAAAGCTTAGGGGATGGTGTAGGATGGGGGATGATTTTAACTGTTCTTCACATCATCTCTCGTTGCCTTCGTTTCCTTGTCTTTCTTGGTTACGCATCGCTCAATGTCCAATGTTGATTTGCATGCCTACTTTTCCAAACCTTGATAAGAGTTTGGAATTGATTAATTGTAGTGTGGAGCCATTGGAAGCAACACTAAAGATATCAATTGACTTCACTCCTCTTTCTATGCTCAAATCCTTATACATTAGTGGAAGTCAAACATCTCAGGAAATTGAAATTTTGTTTAAGGATGACCACAACTGCCTTCCTTCTCTACAAAAAATTGTCTTTCGTAATTGTATAGATCTAAAGGCATTACCAGATTGGATTTGCAGCCTCTCAACACTTCAGTATCTCACAGCTGTCAATTGCAATGATTTGGCATTACTGCCTGAAGGAATGCCTCATCTTACCAACTTACAGACCCTAGAGATCATTGAATGTCCACTCTTAATCAAAGAATTCCAGACAGAAACAAGTGCAACTAGGCCCAAAACTGCTCACATCCCAAACATAATCTTAAAGTGTACTCCTTTTTTATGA 2826 0.3754 MAEQIPYCVASSLIVRLSSAAFRELGRIYGVMDELKRLKDTVESIKAVLLDAEERQERDHSVKIWIRRLKDVLHPADDLLDEFAIHEMTHNMDSGHKNKVKEVFHSLSLNRIVFRHDMAHKIEKIRRNFNDVVQEMSQLNLSPRAGVVKQTDSVRRETSSFVLESDIIGRENSKKEIISFLRQTHTNQNVSVIAIVGIGGLGKTALAQLVYNDVEVQNFFEKRMWVCVSDNFDVKTIVRNMLESLIGSKIDDKLSLDNLQNVLRENLIGKRYMLVLDDIWNESLEKWAQLRTYLMCGAQGSKVLVTTRSKTVAQTMGISDPFVLNGLTSEESWSLLKKITFGDDTRRVNQTLESTGKKIAEKCKGVPLAIRTLGGVLQSKSEESEWIGVLQGDFWKLCEEEDSIMPVLKLSYQNLTPQQKQCFAYCSLYPKDWKIMKDELIQQWMAQGYLECSTEEEQLMEDVGNQIVKVFLMKSIFQDAKMKEHGVIMCFKMHDLMHDLAMHVAGNDCCYLDSEAKRLVGRPMHVWLDNNDNAFRLLGSLDANRLRTLILLSSSLKNLKKEELFVISKFKYLRVLKLSHLSLGDLSAVIGKMKHLRYLYIDFCDKLVGLPESISNLVCLQTWKWVTCEKEIEFSTKVFSKLINLRHLDIECWKASNEKMPIGFGRLRAHWWHESVIYSNWISSLTNIVEISLYMCRSLRYLPPLERLPFLKSLGISYLYDMEYIYYEECFPRTFFPSLERLRIFSCKKLRGWCRMGDDFNCSSHHLSLPSFPCLSWLRIAQCPMLICMPTFPNLDKSLELINCSVEPLEATLKISIDFTPLSMLKSLYISGSQTSQEIEILFKDDHNCLPSLQKIVFRNCIDLKALPDWICSLSTLQYLTAVNCNDLALLPEGMPHLTNLQTLEIIECPLLIKEFQTETSATRPKTAHIPNIILKCTPFL. 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10371 941 FunFam Probable disease resistance protein At1g63360 412 503 - -
Seca4g10371 941 Gene3D Ribonuclease Inhibitor 810 921 IPR032675 -
Seca4g10371 941 SUPERFAMILY L domain-like 492 916 - -
Seca4g10371 941 Gene3D - 10 123 - -
Seca4g10371 941 Gene3D Ribonuclease Inhibitor 529 808 IPR032675 -
Seca4g10371 941 PRINTS Disease resistance protein signature 896 912 - -
Seca4g10371 941 PRINTS Disease resistance protein signature 266 280 - -
Seca4g10371 941 PRINTS Disease resistance protein signature 363 377 - -
Seca4g10371 941 PRINTS Disease resistance protein signature 192 207 - -
Seca4g10371 941 FunFam Probable disease resistance protein At1g61300 148 321 - -
Seca4g10371 941 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 426 IPR027417 -
Seca4g10371 941 Gene3D - 326 411 IPR042197 -
Seca4g10371 941 Coils Coil 35 55 - -
Seca4g10371 941 CDD RX-CC_like 7 126 IPR038005 -
Seca4g10371 941 Pfam Rx N-terminal domain 10 96 IPR041118 -
Seca4g10371 941 Gene3D - 412 504 IPR036388 -
Seca4g10371 941 PANTHER DISEASE RESISTANCE PROTEIN RP 32 856 IPR044974 GO:0006952
Seca4g10371 941 Gene3D - 150 319 IPR027417 -
Seca4g10371 941 Pfam NB-ARC domain 171 414 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10371 Seca-Chr4 239244113 239246938 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10371 189 468 WRKY Transcription Factor Family AT5G45050 23.397 2.69e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10371 - - tpra:123883200 1112.44