Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10364 ATGGATGAATTTTGTGAAGGTTCATGTGTTAACCTTGATGACGATAATATATATATTAATGTTACTGGTGATGAATTTGATGTAAACCATAGTGAAGATGAAAATGATTCGGGTGGTCCTAGTGTGGAGGAAGAGTTAGGTAGAATGGATCATAGAGGTAAAAGAATGGAAGATTTGACTCCTGTTGATATTCGAAACATGGAGTTTGCTAGTGAAGAGCATGGTGAGATATTTTATAGGGCATATGCAAAGCGTCATGGATTTGTTGTTAGAAAGGATGAGATTGATCGGGACATTAAGGGCAATGTTATTATGCGTCAGTTTGTTTGCAACAAAGAGGGTAATAGGAACAAAAAACATTTGATGAGGGTGGATAGGAAAAAAGAACATAGGCCATTAACGCGTCTGGATTGTCAAGCTAAGATACGAATTCACTTAGATTATAAGACAGATAAATGGAAAGCGGTTTCTTTTGTGGAGACCCACAATCATGAGCTTACCCCTTCTACTTTTGTGCACTTACTACCTAGTAATAGAGGGTTGAATAATGCTGATAAAGCCCAAGTAGGGAGGTTGCATGCATATGGTGTTAGAACGTGTCACATAATGGGGTACATGCTAGATCAAAAAGGGGGTTATGGTTCCCTTGGGTTCTGTAGAAAGGATCTGTATAATTATATTGAACGACAGAAGCTAGAAAAGATTAAAGATGGGGATGCACATTCTGCCTTATGTTACATACAAGCAAAGGCAAACAATGATCCCACGCTTCGAGCTAGTTTCCTTGCTTCCGAGGACGGTACTCTAAAGCATTTGTTTTGGGCGGATGGAGGTAGTAGGGCTGATTATTACTGCTTTGGGGATGTTTTGGCATTTGACACTACCTATAAGAAAAACAGATATAACAAGCCATTGGTCATTTTTTCTGGTTGTAATCATCATAGTCAGACTGTTGTTTTTGGTTGTGCTTTGGTTGCTGATGAGACGATTGAGACTTACAAGTGGCTATTGAAAGAATTTTTGCGTGCTATGTCTGATAAACATCCAGCTGCAGTAGTTACAGATGGAGATAGTAGTATGAGAGAAGCTATCAAGCAGGTGTTCCCCAATGCATCACATCGCCTTTGTGCATGGCATTTGCACAAAAATGCGTGTGAAAATGTCAAGAATGCTGGTTTTTTGGACGATTTCAAGGTAGCCATGTATTCTAATTTCACTGAGGATCAATTTGAATTATTTTGGAAGCGAATGGTGGCAAAGCATGGACTTGTAGGAAATAAGTGGGTGTCAAAAACCTATGAGAATAGATCATTGTGGGCCACTGCTTATTTCCGAGATAAATTTTTTGGCCGTATTAGAACAACATCACAGTGTGAGGCTATTAATTCCCTGGTGAAGGCATATGTTAATAAAAAAGATACCATTTTTGAATTCATCAATAGGTTTGAGCAAGTGTTGAGAGAATATAGGAACAATGAGATGATTGCAGATTTCAAAAATCTATTTACGGAGCCAGTCTTAACTACCTCTCTTTGCAAAATTAAGAGTGAGGCGTCAAAAATATTCACATTAGAGATTTTTTGGGAAGTGAAATCTGAGATTGAGGTTGTAGGTGCTTTGAATGTAAATGAACGTCTTGATCAGGGAGATAAATTGATTTTTAAGATGAGCCATTACTGTAATCGCGGAAGTGAATTTCAGGTTGAGTATGATGTAGTGAATTCAAAATTTGTATGTGAATGTAGACTGTTTGAGAGTCGAGGAATCCCTTGTTCTCATATTATATGTGTCATTAGAATCTTGAAAGCATTAACCCACAAAAATGGAAGACCACTAACCAATTAA 1845 0.3783 MDEFCEGSCVNLDDDNIYINVTGDEFDVNHSEDENDSGGPSVEEELGRMDHRGKRMEDLTPVDIRNMEFASEEHGEIFYRAYAKRHGFVVRKDEIDRDIKGNVIMRQFVCNKEGNRNKKHLMRVDRKKEHRPLTRLDCQAKIRIHLDYKTDKWKAVSFVETHNHELTPSTFVHLLPSNRGLNNADKAQVGRLHAYGVRTCHIMGYMLDQKGGYGSLGFCRKDLYNYIERQKLEKIKDGDAHSALCYIQAKANNDPTLRASFLASEDGTLKHLFWADGGSRADYYCFGDVLAFDTTYKKNRYNKPLVIFSGCNHHSQTVVFGCALVADETIETYKWLLKEFLRAMSDKHPAAVVTDGDSSMREAIKQVFPNASHRLCAWHLHKNACENVKNAGFLDDFKVAMYSNFTEDQFELFWKRMVAKHGLVGNKWVSKTYENRSLWATAYFRDKFFGRIRTTSQCEAINSLVKAYVNKKDTIFEFINRFEQVLREYRNNEMIADFKNLFTEPVLTTSLCKIKSEASKIFTLEIFWEVKSEIEVVGALNVNERLDQGDKLIFKMSHYCNRGSEFQVEYDVVNSKFVCECRLFESRGIPCSHIICVIRILKALTHKNGRPLTN. 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10364 614 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 61 598 IPR031052 GO:0006355
Seca4g10364 614 MobiDBLite consensus disorder prediction 27 53 - -
Seca4g10364 614 Pfam FAR1 DNA-binding domain 78 167 IPR004330 -
Seca4g10364 614 SMART 26again6 577 604 IPR006564 GO:0008270
Seca4g10364 614 ProSiteProfiles Zinc finger SWIM-type profile. 566 602 IPR007527 GO:0008270
Seca4g10364 614 Pfam MULE transposase domain 289 383 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10364 Seca-Chr4 239180098 239181942 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g10364 MULE 4.2e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10364 - - ccaj:109792835 773.852