Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10362 ATGCACCTTCTTTTTGGGAAAACTTACATGTTTCATGTTTTTGGCAGTGGTGATCATGACATGTGTGTTCCATTTACGGGGAGTCAAGCATGGACGAGATCAGTTGGATATAAGATTGTTGATGAATGGAGGCCATGGTTCTCCAATGGTCAAGTTGCTGGGTTTACTCAAGGATACGACAAAAATCTTACTTTTCTGACCATAAAGGGATCTGGGCATACTGTTCCGGAATATAAACCACAAGAGGCATTGGATTTTTATAAACGCTTTCTTGCTGGATTGCCATTATGA 291 0.4055 MHLLFGKTYMFHVFGSGDHDMCVPFTGSQAWTRSVGYKIVDEWRPWFSNGQVAGFTQGYDKNLTFLTIKGSGHTVPEYKPQEALDFYKRFLAGLPL. 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10362 96 FunFam Carboxypeptidase 1 93 - -
Seca4g10362 96 SUPERFAMILY alpha/beta-Hydrolases 14 96 IPR029058 -
Seca4g10362 96 Gene3D - 3 93 - -
Seca4g10362 96 Pfam Serine carboxypeptidase 14 92 IPR001563 GO:0004185|GO:0006508
Seca4g10362 96 ProSitePatterns Serine carboxypeptidases, histidine active site. 63 80 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10362 Seca-Chr4 239165343 239168279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10362 16 96 Calmodulin-binding Proteins AT2G22960 53.086 6.35e-29 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10362 K16296 - gmx:100792057 169.859