Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10356 ATGGAATTTGAGTCTATTGAGAAAGTTAGAGAGTTTTATAAATCTTTTGCTAAAAAAAGGGGTTTTGGAGTACGTATTCGTTCAACTAAACCAAAGAGAGCAGTTTTGGTATGTTGCAATGAAGGTCAACACCAAGTGAATAGCTCTGGATGTGAAGAAATTCAAGATAGCACCGGTCAGACTAAAAGAAAATGTTCAACCACCCGGGGGGGTTGTCAAGCTTCACTTATTGTTTCAAGAGGCACAACACAGAGTAGTTGGTTTATACAATCTTTTAACAATGATCATAACCATGTCATGGTTAGCCCCAAGAGCGTGTCTTATATGAGGTGTCATAAAAAGATGACCATTGCTGCAAAAAATCTTGTTGAAAAATTTGAGGAAGAAGGCTTGCCGACGGGAAAGGTTGCTAAAATTTTCAATGATGGTGACTTAGCTTTCTCTAATAGGGATTGTTGGAATCACATTAGAAATTTACGTAGAAAGAATTTAGATGTTGGAGATACACAAGCTGTTTTTAATTACTGTAAAAGAAAGCAGGCTGAAAATTGTAATTTTTATTATTCAATCCAAACTGATGATGAGTCTCGGATGGTAAATTTCTTTTGGGTTGATGCTAGATCAAGAGCATCTTACCAGCAATTTGGAGATGTTATAACTTTTGAATTTATGGGGATATTGTGCCGACACATATTAGTAGGTGTTGGAACTGAAAAAAAGCTAACTAATGGTTGGGATAAACATTCATGA 750 0.3587 MEFESIEKVREFYKSFAKKRGFGVRIRSTKPKRAVLVCCNEGQHQVNSSGCEEIQDSTGQTKRKCSTTRGGCQASLIVSRGTTQSSWFIQSFNNDHNHVMVSPKSVSYMRCHKKMTIAAKNLVEKFEEEGLPTGKVAKIFNDGDLAFSNRDCWNHIRNLRRKNLDVGDTQAVFNYCKRKQAENCNFYYSIQTDDESRMVNFFWVDARSRASYQQFGDVITFEFMGILCRHILVGVGTEKKLTNGWDKHS. 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10356 249 Pfam FAR1 DNA-binding domain 11 101 IPR004330 -
Seca4g10356 249 PANTHER OS01G0519700 PROTEIN 1 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10356 Seca-Chr4 239100402 239101151 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g10356 FAR1 3.9e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10356 - - mtr:112420114 356.295