Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10320 ATGGGTGAATATGTGTTTATGAATACAAGGGTCTGTTTGAATAGGTCTAATGGATTTGATGAGATGAGGGATAGTCTTGGTGAGTCTGAGACCTTTGGGGATGATGATTCTGATGGGCTTGCGGCGGAATCCGGTGGAGTTGGTGGTGATGATGAGGAGGATGAAACTTCCTTTAGAGTGCTGGCTGATTCTATCCAGAAGTTTGGGAAAATATGTGAGAAGATTGAGAATACTAAGAGGCAGCAGATGATGGAGTTGGAGAAGATGAGGTTGGATTTTAATAGAGAGTTGGAGCTGCAGAAAAAGCAGATTTTGGAAAGGGCTTAG 327 0.4312 MGEYVFMNTRVCLNRSNGFDEMRDSLGESETFGDDDSDGLAAESGGVGGDDEEDETSFRVLADSIQKFGKICEKIENTKRQQMMELEKMRLDFNRELELQKKQILERA. 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10320 108 Coils Coil 72 103 - -
Seca4g10320 108 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 2 108 IPR044823 -
Seca4g10320 108 MobiDBLite consensus disorder prediction 23 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10320 Seca-Chr4 238692504 238693169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10320 58 105 Trihelix Transcription Factor Family AT3G14180 45.833 1.54e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10320 - - vum:124831447 160.999