Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10317 ATGATTCAGGGAGCTGTAACACATGAAGATTTTGAAGGACATAAGGGAACAATAGAAGCTGGTGACTTTCAGTGGATGACTGCAGGGAGAGGGATAGTTGACTCAGAAATCCCTGTGGCTCAAGGAACCCAAAAGGGATCAACCTTGCTTCCAAATATAAGATAG 165 0.4364 MIQGAVTHEDFEGHKGTIEAGDFQWMTAGRGIVDSEIPVAQGTQKGSTLLPNIR. 55
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10317 54 Pfam Pirin 1 42 IPR003829 -
Seca4g10317 54 Gene3D Jelly Rolls 1 53 IPR014710 -
Seca4g10317 54 SUPERFAMILY RmlC-like cupins 1 44 IPR011051 -
Seca4g10317 54 PANTHER PIRIN-RELATED 1 47 IPR012093 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10317 Seca-Chr4 238673589 238674583 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10317 1 38 Calmodulin-binding Proteins AT3G59220 68.421 4.18e-14 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10317 K06911 - ini:109190825 92.0485