Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10304 ATGGGGAGGCCACCTGGGTCTAAGAACAAGCCTAAGCAGCCCATCCTAATCAAGGAGGACAACAATGAGTATCTCAAACCAATCATGATTGAAATCCCTGCTGGAAAATATGTTGTTAAGGTACTTGGTCGAGTTGTTGGAGGGAAGGTTGTGGCAGCAAGTCGTGTGGTTGTCATGGCCTCAATGTTTAAGAAGATTAAGTATCACAGGGTGCCCTTCATCAATGGAAATGTTTAG 237 0.4473 MGRPPGSKNKPKQPILIKEDNNEYLKPIMIEIPAGKYVVKVLGRVVGGKVVAASRVVVMASMFKKIKYHRVPFINGNV. 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10304 78 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 2 41 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10304 Seca-Chr4 238491590 238492058 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10304 2 44 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 46.512 2.79e-09 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10304 - - tpra:123915288 51.6026