Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10295 ATGGTTGGGGAATCAAGAAAGTGGGTGATCCTCATAGCATCAATATGGATACAAGCATTCACTGGGACAAACTTTGACTTCTCATCCTACTCTTCTGATCTCAAATCAGTTCTTGATATAACTCAGCTTCAGCTGAATTATCTATCAGTGGCATCAGATATGGGAAAAGCATTTGGGTGGTGTTCTGGGGTCTCACTCATGTATTTCCCATTATGGGTGGTTTTGTTCATGGCTGTTTTCTTGGGACTTGTTGGTTATGGCTTTCAATGGCTTGTCATTCAGAGAATCATCACTTTGCCTTATTTTGTGCAGGTCTTTTTTCTATGCTTGATTGCTGGATGTAGCATCTGCTGGTTCAACACAATCTGCTATGTCTTATGTATCAGACATTTCACAGCTAACCGTTCACTTGCATTATCCCTGAGTATCAGTTTCAATGGTGTAAGTGCAGCTTTATACACTCTCATTGCCAATGCAATAAACTCAAGTAATGACACTCTTTATCTTTTCCTCAATGCCCTTGTTCCTTTACTTGTTTCTGTTATTGTACTCATCCCAATTCTCCACAAACCACAGCCTCAGCCACATTCTGTTGACACCCTTCAGTGTGATTCCTTGATTTTTCTCTGCCTCAACATCCTTGCCCTTGTTACAGGCCTCTACCTTCTCTTCCTATATTCCCTCTCTAGTTCTACCCCAACCATAGCTCGTGTTATCCTTTCAGGTGCCATTTTTCTCCTTGCATTGCTCTTGTTGTTTCCTAGCATTGTGTATTCTAGAGAATGGTCTTGCTTAACTGTCCCTACAAGCTTTTCCTTTTATGATTCAAGATTCACTCTTGATGATCATGAGCTTCAAAAGGAACTCATTGGTAATGAGGATATTGCAAGGAATGGAATGAGTGCACATAGCTTGAGAGAGATGAAATGTTGTCTTGTGAATTTGTTGGAGAGAGAGCAGCTTACAATTCTTGGAGAAGAGCATCCAATCAGGTTGCTAATATGTAGATGGGACTTTTGGCTATACTATATAGCATATTTTTGTGGAGGAACGATTGGGTTGGTTTATAGCAACAACTTGGGACAAATTTCTCAATCACTTGGATTCAATTCTCAGACTAGCTCTCTTGTCACACTCTACTCCACATGTTCCTTCTTTGGTAGACTTCTGGCAGCTGCACCTGACTTCTTGAGCGGGAAGATATACTTTGCAAGAACTGGATGGTTTGCAGCAGCCCTGGTGCCAACACCCATTGCATTCATTTTGTTAGCCATATCTGGCAGTGAATCAGCATTACACATAGGCACAAGCTTAATTGGACTGAGCTCTGGCTTCGTGTTTTCTGCAGCAGTGTCTATTACATCAGAGCTATTTGGTCCAAACAGTGTTGGTGTGAACCACAATATCCTCATCACCAACATTCCTTTAGGCTCATGCCTTTATGGCCTTCTTGCAGCTTTGGTTTATGATTCAAATGCAATGAGCTCAAATTACAGAACATGGCTGCGTGAAATTTCCATGTGCATGGGGAGGAAATGCTACCTACAGACATTTATATGGTGGAGTTGTATTTCAATGGTTGGATTGGTTTCAAGCTGCTTGCTTTTCTTGAGGACTAGGCATGCTTATGACAGTTTTGAAAGAAATAAAGATAGAAACAGAACACAGACAACATAG 1677 0.4109 MVGESRKWVILIASIWIQAFTGTNFDFSSYSSDLKSVLDITQLQLNYLSVASDMGKAFGWCSGVSLMYFPLWVVLFMAVFLGLVGYGFQWLVIQRIITLPYFVQVFFLCLIAGCSICWFNTICYVLCIRHFTANRSLALSLSISFNGVSAALYTLIANAINSSNDTLYLFLNALVPLLVSVIVLIPILHKPQPQPHSVDTLQCDSLIFLCLNILALVTGLYLLFLYSLSSSTPTIARVILSGAIFLLALLLLFPSIVYSREWSCLTVPTSFSFYDSRFTLDDHELQKELIGNEDIARNGMSAHSLREMKCCLVNLLEREQLTILGEEHPIRLLICRWDFWLYYIAYFCGGTIGLVYSNNLGQISQSLGFNSQTSSLVTLYSTCSFFGRLLAAAPDFLSGKIYFARTGWFAAALVPTPIAFILLAISGSESALHIGTSLIGLSSGFVFSAAVSITSELFGPNSVGVNHNILITNIPLGSCLYGLLAALVYDSNAMSSNYRTWLREISMCMGRKCYLQTFIWWSCISMVGLVSSCLLFLRTRHAYDSFERNKDRNRTQTT. 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10295 558 Gene3D MFS general substrate transporter like domains 301 541 IPR036259 -
Seca4g10295 558 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 544 - -
Seca4g10295 558 Pfam Nodulin-like 7 257 IPR010658 -
Seca4g10295 558 SUPERFAMILY MFS general substrate transporter 210 541 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10295 Seca-Chr4 238417887 238424785 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10295 1 550 Nodulin-like Gene Family AT1G31470 55.978 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10295 - - gmx:100804951 853.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g10295 4 238417887 238424785 Seca4g10295 4 238417887 238424785 ECH