Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca4g10244 | ATGAATTGCTTTTACTACTTCAAAGACAAATCCAGGAGCAGGAGGCAAAGATCAGCACCTGAACTGAAAAAGCAAGAGAAACTCCAGTTTTCAGGGGATGAAAGAGTCACCAAGTCTTCATGCTCATCTGCCTCACCTCGCGGTATACCAGAGCTGTATGAGGAGAAGGCTCAGAATTTAAGGGCCTTCTCCTTCACAGAGCTCAAACGTGCAACAAATGATTTCAGCAGGCTTCTTAAGATAGGAGAAGGTGGATTTGGAAGTGTATTTAAAGGTTCAATCAAGCCTGTTCATGGGGATGGTGATCCTATTTTAGTTGCCATCAAAAGGCTTAACAAGGATGCATTACAGGGTCATAAGCAATGGTTGACTGAAGTTCAGTTTCTTGGTGTTGTGGAGCACCCAAATCTTGTCAAGCTTATTGGATACTGTGCTTTGGATGGTGAAAGAGGCATCCAGAGACTACTTGTGTATGAATACATGCCGAATAAAAGCTTAGATTTTCATCTTTTCAATAAAGCATGTGATCCTCTTCCTTGGAAAACAAGACTTGAAATAGCACTTGGAGCAGCTCAAGGGTTATCTTATTTGCATGAAGAATTAGAAATTCAGGTCATATATCGAGATTTTAAATGTTCAAATGTACTACTGGATGAAAATTTTAAGCCAAAACTTTCTGATTTTGGACTTGCTAGGGAGGGACCAGTAGCTGGGAATACTCATGTTTCAACTGCTGTGATGGGAACATATGGTTATGCTGCTCCAGATTACATAGAGACCGGCCATCTCACTGCCAAGAGTGATGTGTGGAGTTTTGGTGTGGTGCTATATGAAATGCTTACCGGGAGGCGTTCATTGGAAAGAAACAGGCCCAAAACAGAGCAGAAACTTTTGGAGTGGGTGAAGCAATATCCTCCTGATAGCAAAAAGTTTGATTTGATAATGGATGCAAGACTTGAAGGACAATATTCCATTAATGTAGCACGAAAATTCGCCAAACTCGCGGATCATTGCCTGCATAAGAGTGCGAAAGATCGGCCAACAATGAGTCAGGTGGTAGAGATATTGAAGCAGATAATCCAAGATGAAGAGCACCCTGAAGAGAAAAGCATTGAGGTATCTGAAAATGATCCAGTTGAGCCTGAAGAAAAGGCAAGTGAATCAGCCTCTTCAGAGTTATGGAAAAAGAGGATGGAACATCTTGCAAAACTTGGTGAGCATGTAGAGAGTGCTAGTAGGAGAAGATTTATGATCCTTCAGAGAGCCAATGTGTCTTCATAG | 1281 | 0.4161 | MNCFYYFKDKSRSRRQRSAPELKKQEKLQFSGDERVTKSSCSSASPRGIPELYEEKAQNLRAFSFTELKRATNDFSRLLKIGEGGFGSVFKGSIKPVHGDGDPILVAIKRLNKDALQGHKQWLTEVQFLGVVEHPNLVKLIGYCALDGERGIQRLLVYEYMPNKSLDFHLFNKACDPLPWKTRLEIALGAAQGLSYLHEELEIQVIYRDFKCSNVLLDENFKPKLSDFGLAREGPVAGNTHVSTAVMGTYGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQKLLEWVKQYPPDSKKFDLIMDARLEGQYSINVARKFAKLADHCLHKSAKDRPTMSQVVEILKQIIQDEEHPEEKSIEVSENDPVEPEEKASESASSELWKKRMEHLAKLGEHVESASRRRFMILQRANVSS. | 427 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca4g10244 | 426 | ProSiteProfiles | Protein kinase domain profile. | 75 | 360 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca4g10244 | 426 | Gene3D | Transferase(Phosphotransferase) domain 1 | 161 | 381 | - | - | |
Seca4g10244 | 426 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 8 | 161 | 370 | - | - | |
Seca4g10244 | 426 | MobiDBLite | consensus disorder prediction | 364 | 392 | - | - | |
Seca4g10244 | 426 | MobiDBLite | consensus disorder prediction | 11 | 33 | - | - | |
Seca4g10244 | 426 | Gene3D | Phosphorylase Kinase; domain 1 | 49 | 160 | - | - | |
Seca4g10244 | 426 | SUPERFAMILY | Protein kinase-like (PK-like) | 58 | 370 | IPR011009 | - | |
Seca4g10244 | 426 | ProSitePatterns | Protein kinases ATP-binding region signature. | 81 | 109 | IPR017441 | GO:0005524 | |
Seca4g10244 | 426 | PANTHER | OS01G0588500 PROTEIN-RELATED | 27 | 360 | - | - | |
Seca4g10244 | 426 | CDD | STKc_IRAK | 81 | 359 | - | - | |
Seca4g10244 | 426 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 205 | 217 | IPR008271 | GO:0004672|GO:0006468 | |
Seca4g10244 | 426 | Pfam | Protein tyrosine and serine/threonine kinase | 80 | 356 | IPR001245 | GO:0004672|GO:0006468 | |
Seca4g10244 | 426 | MobiDBLite | consensus disorder prediction | 11 | 47 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca4g10244 | Seca-Chr4 | 237565680 | 237571312 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca4g10244 | 1 | 394 | Glycoside Hydrolase | AT3G07070 | 40.909 | 1.56e-94 | 288 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Seca4g10244 | PK_Tyr_Ser-Thr | 2.7e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca4g10244 | - | - | gmx:100784625 | 723.776 |