Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10213 ATGGCAAAGCATACTTTTCCTCTCATGTTCTTAATGTCTTTTTTTCTTACATGCACAATTCCCTTGGTGTGTGATGCTAATGGCAATGAGAACAATAAGCTTCACATTGTATACATGGGCTCACTTCCCAAGGGAGCATATTCCCCAACCTCTCACCATCTCAGTTTGCTGCAACTAGTTATGAATAAAAGTGATGTAGCAAGCCACTTGGTTCGAAGTTACAAGAGAAGCTTCAATGGCTTTGCTGCTAAACTCAATGATCAACAAAGAGAAAAGCTCGCTGACATGGAAGGTGTGGTCTCTGTTTTCCCAAGCCAAAAACTTCACCTCCACACCACCAGATCATGGGACTTTGTGGGACTACGCCAATCAATTAAAAGACAACCAAATGTTGAGAGTGATGTGGTGATTGGGGTCATCGATTCCGGAATTTGGCCAGAATCTGAAAGTTTCAGTGATGCAGGTTTTGGTCCAATTCCAAAGAAGTGGAAGGGCACTTGTGCAGGTGGTCATAACTTTACTTGCAATAGGAAAATCATTGGAGCACGAAACTATGACGCTGATAATCTTGGAGATGGCAGTGTAAGAGATATTGAAGGTCATGGAACTCACACAGCTTCAACAGCAGCTGGAAATGAGATAAAAGGTGTGAGCTTTTATGGGCTTGCACAAGGTAATGCTAGAGGGGGAGTCCCATCTGCTAGGATTGCTTCATACAAAGTTTGCCAACCTGAAGGGTGTGATAGTGCTGATGTGTTATCTGCTTTTGATGATTCCATTGCTGATGGAGTTGACATTATCTCCATCTCACTTGGGGGTTCATTTCCCACTGACTTTGTGCAAGATACTATTGCCATTGGTGCTTTTCATGCTATGGAGAAAGGGGTTCTCACTGTGCACTCTGCAGGAAATGATGGTCCTTCTTCTAGTACTGTATATAGTGCAGCCCCTTGGTTACTGTCTGTTGCAGCAAGTAGCATTGATCGCCAATTTATTGACAAGGTAATTCTTGGGAATGGAAAGATGTTAACAGGAAGGTCAGTGAATACTATCATGTCAAATGGCACAAAAGTTCCTATACTTGGACATAATGGTGATGGAACAACTACTTGCAAGGGAGAGGATGCAGAAAATTGTGCATGTATGAATAACCAGCTAGCAAAGGGAAGAATTATTTTATGTGGAGTGCCTCAGGGAACAGAAACTGCTTATCAAGATGGTGCATTTGGTTCAATCACAAAGGATGATTCGATTAGTGATGTGTCTTTTGTGACATATTTCCCTTCTCTGTTCTTAAGTTCAAAAGATTATGATTTTATCAAGTCATATGCAAGATCAAGTAAAACTCCACAAGCTGAAATATTGAAGAGTGAGATCTTTGAAGATGGTAATGCTCCTTTAGTTGCTAGTTTCTCTTCAAGGGGGCCAAATCCCTTGATTTCAGAGATTTTGAAACCAGATATAAGTGCCCCAGGGGTGGATATCTTTGCTTCATATTCACCTGAAGCATCACCTTCAGGGTCTCCAAATGACAAGAGAAAGGTAAAATACAACATACTCTCTGGAACCTCTATGTCTTGTCCCCATGTTGCTGGAATATCTGCATATGTGAAATCATTTCACCCAGATTGGTCACCAGCAGCCATCAAATCAGCTATTATGACCACAGCTCAACCCCTTAATGGTACATATAATTTGACTGGTGAGTTTGCTTATGGATCTGGGAATGTCAATCCAAAACAAGCTATTGACCCTGGGCTTGTTTATGACATTTCTAAGGAAGATTATGTGCAAATGCTTTGCAACTATGGTTATGATGCTAAAAAAATTAAACAGATTGCTGGAGGAAATTCAACCTGTCATGGAGCCTCTGATAGATCTCTGGTGAAAGACACAAATTATCCTGCATTGGTGATTCCAGTTAAGCCTTTGAAGCCATTCACTGTTCAAATTACTAGAACAGTGACAAATGTTGGCCTTCCCAACTCAAAATACAAGGCTACTGTCTTCCCAAATTCAAAACTCAACATTAAGGTGGAGCCTAAGCTTTTGTCCTTCAAATCATTGAATGAGAAACAATCCTTTGTTGTCACTATTGTTGGAGGAGCAAAACCAAAAGAAAAGGTGTTTACCTCATCAATTGTATGGTCAGATGGCACCCATAGTGTGAAGAGTCCTGTTATTGTGCTATGA 2193 0.4086 MAKHTFPLMFLMSFFLTCTIPLVCDANGNENNKLHIVYMGSLPKGAYSPTSHHLSLLQLVMNKSDVASHLVRSYKRSFNGFAAKLNDQQREKLADMEGVVSVFPSQKLHLHTTRSWDFVGLRQSIKRQPNVESDVVIGVIDSGIWPESESFSDAGFGPIPKKWKGTCAGGHNFTCNRKIIGARNYDADNLGDGSVRDIEGHGTHTASTAAGNEIKGVSFYGLAQGNARGGVPSARIASYKVCQPEGCDSADVLSAFDDSIADGVDIISISLGGSFPTDFVQDTIAIGAFHAMEKGVLTVHSAGNDGPSSSTVYSAAPWLLSVAASSIDRQFIDKVILGNGKMLTGRSVNTIMSNGTKVPILGHNGDGTTTCKGEDAENCACMNNQLAKGRIILCGVPQGTETAYQDGAFGSITKDDSISDVSFVTYFPSLFLSSKDYDFIKSYARSSKTPQAEILKSEIFEDGNAPLVASFSSRGPNPLISEILKPDISAPGVDIFASYSPEASPSGSPNDKRKVKYNILSGTSMSCPHVAGISAYVKSFHPDWSPAAIKSAIMTTAQPLNGTYNLTGEFAYGSGNVNPKQAIDPGLVYDISKEDYVQMLCNYGYDAKKIKQIAGGNSTCHGASDRSLVKDTNYPALVIPVKPLKPFTVQITRTVTNVGLPNSKYKATVFPNSKLNIKVEPKLLSFKSLNEKQSFVVTIVGGAKPKEKVFTSSIVWSDGTHSVKSPVIVL. 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10213 730 Pfam Fibronectin type-III domain 631 729 IPR041469 -
Seca4g10213 730 CDD PA_subtilisin_like 335 454 - -
Seca4g10213 730 Gene3D - 328 461 - -
Seca4g10213 730 CDD Peptidases_S8_3 108 557 IPR034197 -
Seca4g10213 730 ProSiteProfiles Serine proteases, subtilase domain profile. 115 583 - -
Seca4g10213 730 FunFam Subtilisin-like protease SBT1.5 134 339 - -
Seca4g10213 730 SUPERFAMILY Subtilisin-like 132 587 IPR036852 GO:0004252|GO:0006508
Seca4g10213 730 FunFam Subtilisin-like protease SBT5.3 24 111 - -
Seca4g10213 730 Gene3D Peptidase S8/S53 domain 134 596 IPR036852 GO:0004252|GO:0006508
Seca4g10213 730 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 36 728 IPR045051 -
Seca4g10213 730 PRINTS Subtilisin serine protease family (S8) signature 521 537 IPR015500 -
Seca4g10213 730 PRINTS Subtilisin serine protease family (S8) signature 132 151 IPR015500 -
Seca4g10213 730 PRINTS Subtilisin serine protease family (S8) signature 197 210 IPR015500 -
Seca4g10213 730 Gene3D - 600 730 - -
Seca4g10213 730 Pfam Subtilase family 133 560 IPR000209 GO:0006508|GO:0008236
Seca4g10213 730 ProSitePatterns Serine proteases, subtilase family, serine active site. 522 532 IPR023828 -
Seca4g10213 730 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 111 IPR037045 -
Seca4g10213 730 Pfam Peptidase inhibitor I9 35 111 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10213 Seca-Chr4 236679533 236682307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10213 25 729 Subtilisin-like Serine Gene Family AT5G59100 54.482 0.0 785
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10213 - - psat:127076787 877.856