Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10194 ATGGAAGGGGAGAGAGATGTTCCCAATTATGAGCTTCAGGTTTCATTCACAAACACACCTCAACCCATCCATGAAATGGCTTTTGTTCAATTTGAAGAAAATCAAGTTCTTAGCTTCTTGGCTCCTTCTACACAATCTCAATCTCTAAACAACAACACCACCACCACCGCTACTGCGACCGCCACCGTTTCCGCGGCAACCACAACCACCATTGGGTTCAGCCATAACGACCTTCTCACCAGAACTTCTTGGAATAATAACGAACAGAACGATTTATATGAATTAATTAACTTTCAGGTGAGAACTCTGGATCCCAAGGCTGTTAATAATGATGAAAATTGCACTGGAGGAAATACAAGTGATGGAAACAACACATGGTGGAGGAGTGGAGGGTCAGAGAAGAGCAAGGTGAAAGTGAGGAGGAAGCTTAGAGAACCAAGGTTTTGTTTCCAAACAAGAAGTGATGTGGATGTGCTTGATGATGGTTACAAATGGAGGAAGTATGGTCAGAAAGTTGTCAAAAATAGCCTTCATCCAAGAAGTTATTACCGCTGCACCCATAACAATTGTAGGGTGAAAAAAAGAGTTGAACGACTCTCAGAGGATTGTCGTATGGTGATAACCACTTACGAAGGCAGACACAATCACTCTCCTTGCGATGATTCAAATTCATCTGAACATGAATGTTTTACCTCTTTTTGA 702 0.4188 MEGERDVPNYELQVSFTNTPQPIHEMAFVQFEENQVLSFLAPSTQSQSLNNNTTTTATATATVSAATTTTIGFSHNDLLTRTSWNNNEQNDLYELINFQVRTLDPKAVNNDENCTGGNTSDGNNTWWRSGGSEKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHECFTSF. 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10194 233 ProSiteProfiles WRKY domain profile. 154 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca4g10194 233 SMART WRKY_cls 159 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca4g10194 233 SUPERFAMILY WRKY DNA-binding domain 151 217 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca4g10194 233 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 55 220 IPR044810 GO:0003700
Seca4g10194 233 Pfam WRKY DNA -binding domain 160 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca4g10194 233 Gene3D WRKY domain 145 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca4g10194 233 MobiDBLite consensus disorder prediction 109 131 - -
Seca4g10194 233 FunFam WRKY transcription factor 57 145 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10194 Seca-Chr4 236345564 236353286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10194 3 233 WRKY Transcription Factor Family AT2G44745 56.017 7.92e-74 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca4g10194 WRKY 1.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10194 - - gmx:100800671 377.096