Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10168 ATGGGTTCACTTCCTAGGGGAGAATATTCCCCAACCTCTCACCATCTAAGTCTGTTGCAACAAGTTATGGACATCGGTGACATAGCAAGCCACTTTGTTCGAAGTTACAAGAGGAGCTTTAATGGTTTTGTTGCTAAACTCAACTATCAACAGAGAGAAAAGCTTGCCAACATGGAAGGTGTTGTCTCTGTTTTCCCCAGCAAAACACTTTACCTTCAAACCACAAGGTCATGGGATTTTGTGGGGCTATGTGAATCATTTAAAAGACAACAAAAAGCTGAGAGTGATGTGGTGATTGGAGTCATAGACACTGGAATTTGGCCAGAATCTGAAAGTTTCAGTGATGCAGGTAATCAAAGAATGTGTTCAAGGTTTCGATACTCACTAAACACATTCTTAAGGAGAAATGTTTTGGGCCTATTCCAACGAAGTGGAGGGGCACTTGTGAAGGTGGTGGTAACTTGCAACAGGAAAATCATTGGGGCGCGAAACTATGATAGCAGGCATGTTGGAGATGGCACTGCCAGAGACCGTGAAGAGGGTACTGCAAGAGGGGGTGTCCCATCTTCGAGGATTGCTGCATACAAAGTTTGTCAACCAAATTCAGGGTGTAACGGTGCTGATGTGTTATCTGCTTTTGATGATGCCATTGCAGATGGAGTTGACATCATCACCATCTCACTTGGGAGTGGATCAGTGAGTGACTTCGTGAGAGATTCTATTGCTATTGGTTCTTTTCATGCTATGGAGAAAGGGGTACTCACTGTGCACTCTGCAGGCAATAAAGGTCCTGATCCCAATTCTGTTTCTAGTGTAGCACCCTGGTTACTATCTGTTGCAGCAACTACCATTGATCGCCAATTCATTGACAAGGTGACTCTTGGTAATGGAAAAACCTTGTGGGGAAGGTCAGTGAATACCATTGTGTCGAATGGCACAAAAGTACCTATAGTTGTGCGTAATTCTGATGATAAAAAACGTTGTACAGGGGTGACTCCAGAAAACTGTGATTGTGTAGACAGCGAATTGGTGAAAGGAAAAATTGTTTTATGTGAAGCATTTACTAGAACAGATGTGGAATATCTGCATATGTAA 1095 0.4292 MGSLPRGEYSPTSHHLSLLQQVMDIGDIASHFVRSYKRSFNGFVAKLNYQQREKLANMEGVVSVFPSKTLYLQTTRSWDFVGLCESFKRQQKAESDVVIGVIDTGIWPESESFSDAGNQRMCSRFRYSLNTFLRRNVLGLFQRSGGALVKVVVTCNRKIIGARNYDSRHVGDGTARDREEGTARGGVPSSRIAAYKVCQPNSGCNGADVLSAFDDAIADGVDIITISLGSGSVSDFVRDSIAIGSFHAMEKGVLTVHSAGNKGPDPNSVSSVAPWLLSVAATTIDRQFIDKVTLGNGKTLWGRSVNTIVSNGTKVPIVVRNSDDKKRCTGVTPENCDCVDSELVKGKIVLCEAFTRTDVEYLHM. 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10168 364 Pfam Peptidase inhibitor I9 12 72 IPR010259 -
Seca4g10168 364 Gene3D Peptidase S8/S53 domain 174 284 IPR036852 GO:0004252|GO:0006508
Seca4g10168 364 ProSiteProfiles Serine proteases, subtilase domain profile. 77 364 - -
Seca4g10168 364 Pfam Subtilase family 95 283 IPR000209 GO:0006508|GO:0008236
Seca4g10168 364 Gene3D - 285 354 - -
Seca4g10168 364 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 355 IPR045051 -
Seca4g10168 364 SUPERFAMILY Subtilisin-like 72 305 IPR036852 GO:0004252|GO:0006508
Seca4g10168 364 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 73 IPR037045 -
Seca4g10168 364 CDD PA_subtilisin_like 292 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10168 Seca-Chr4 235766985 235768707 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10168 1 362 Subtilisin-like Serine Gene Family AT5G59190 50.513 2.80e-113 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10168 - - fve:101312607 354.369