Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10167 ATGCTTTGCAACTATGGTTATGATGCTGAAAAAATTAAACTGATTCCTGGAGGAAATTCAACTTGCCATGGAGCTTCCCAAAGATCATTGGTAAAAGATATCAACTATCCTGCATTGGAGATTCCAGTTGAGCCCCTCAAGCCTTTCATTGTTAAGGTTAATAGAACTGTGACAAATGTTGGGTTTCCCACCTCATGCTACAAGGCTACTGTCTTCCCAAATTCAAAACTCAACTTCACAGTGGAGCCTGAGCTTTTGTCCTTCAAGTCATTGAATGAGAAACAATCTTTTTTGTCACTGTTGTTGGAGGAGCAAAACCAAAAGAAACCGTGTTTTCCTCGTCACTTATATGGTCAGATGGCACCCATAGTGTTAGGAGTCCAATTATTGTGTTGTGATCTTAATACGTGTTATGGCAATTAA 423 0.3948 MLCNYGYDAEKIKLIPGGNSTCHGASQRSLVKDINYPALEIPVEPLKPFIVKVNRTVTNVGFPTSCYKATVFPNSKLNFTVEPELLSFKSLNEKQSFLSLLLEEQNQKKPCFPRHLYGQMAPIVLGVQLLCCDLNTCYGN. 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10167 140 Gene3D - 2 118 - -
Seca4g10167 140 Pfam Fibronectin type-III domain 33 97 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10167 Seca-Chr4 235766507 235766929 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10167 2 98 Subtilisin-like Serine Gene Family AT5G59100 45.455 1.06e-23 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10167 - - mtr:11439741 127.102