Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10071 ATGGAGGAAGAACTTAGAATTAAGGCAATCGAGGAACTTGTGAGAGGGCGTGAGATTGCTAACCATCTTAGACAAGTCATGATTAGTAGTGAAAATGATGAATCAATTACCCAACATCTTGTTAACAACATGCTCCGTTCATTTACCAATACCCTATTCCTCTTGGATAAATTTGAATCCCAAGAGGTTTCTCAGATCCACCAACAGAGAGACTCTTCTTCTAAATCTGAGGACTCTCAAGAAAGTTATTGCAAGAGTAGTTCTACTTCTACAGCCGGTAAGGACAGAAGAGGGTGCTATAAGAGAAGAAAAACAACACAAACATGGGAGAAGGTGACAGAAATTCCAGTTGATGATTGCCATCAATGGAGAAAGTATGGTCAAAAGGAGATTCTCAATAACAAATATCCAAGGAACTATTACAGATGCACTCACAAATTTGATCAGAGATGCCAAGCAACCAAACAGGTGCAGAGAATTCAAGAGGAGCCTCCTTTGTATAAGACAACCTATTATGGCCACCACACTTGCAAAAACTTACTAAACCCTGAGATCATACTTGATCCTACTTCTCCTCCTAATACTATATTGCTTAGCTTTAACAACACCTTCCCAACTCCAACTAAACAGGAGTGCCCCTTCTTATCCTCATCTTTTCCCTCACCACCACCACCACCTGTGAACAAGGAGTGTAAGGAGGAGCCTCCCTCATCTTCCTTAGATGATTACCTGCTCCCTCCACAGCCAACTTTGGATGATTCTTCAAGGCATAATGTCACTCTTGAATCTGACCACAGCTGGGATGTGATGTCTGGTGTTATGTTGTATGATTCTGTTGAGCTTGATGATGTCTTTCAGCCTTTTGTTGGATTTTGGTGA 879 0.413 MEEELRIKAIEELVRGREIANHLRQVMISSENDESITQHLVNNMLRSFTNTLFLLDKFESQEVSQIHQQRDSSSKSEDSQESYCKSSSTSTAGKDRRGCYKRRKTTQTWEKVTEIPVDDCHQWRKYGQKEILNNKYPRNYYRCTHKFDQRCQATKQVQRIQEEPPLYKTTYYGHHTCKNLLNPEIILDPTSPPNTILLSFNNTFPTPTKQECPFLSSSFPSPPPPPVNKECKEEPPSSSLDDYLLPPQPTLDDSSRHNVTLESDHSWDVMSGVMLYDSVELDDVFQPFVGFW. 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10071 292 MobiDBLite consensus disorder prediction 79 94 - -
Seca4g10071 292 MobiDBLite consensus disorder prediction 217 257 - -
Seca4g10071 292 MobiDBLite consensus disorder prediction 65 100 - -
Seca4g10071 292 Gene3D WRKY domain 100 172 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca4g10071 292 SMART WRKY_cls 117 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca4g10071 292 ProSiteProfiles WRKY domain profile. 118 175 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca4g10071 292 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 13 202 IPR044810 GO:0003700
Seca4g10071 292 SUPERFAMILY WRKY DNA-binding domain 112 178 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca4g10071 292 Pfam WRKY DNA -binding domain 118 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca4g10071 292 MobiDBLite consensus disorder prediction 217 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10071 Seca-Chr4 234014472 234016206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10071 6 177 WRKY Transcription Factor Family AT3G56400 38.636 2.09e-37 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca4g10071 WRKY 6.4e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10071 - - aprc:113861812 317.775
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g10071 4 234014472 234016206 Seca4g10071 4 234014472 234016206 ECH
Seca4g10071 4 234014472 234016206 Seca4g10071 4 234014472 234016206 PCT