Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10017 ATGGCCCTGGGTTTCTTTCTCGTCTTCCTCCTACATTTAGTCTTAGCGGCATCATCAGATATCCGACCTGGGTTTTACTCGAATTCATGTCCTAAAGCAGAATCCATAGTCCGAGATGTCATGAAGAGGGCCCTCATAAGAGAACCCAGAAGTGTTGCCTCTGTTATGCGTTTCCAATTCCATGATTGTTTCGTCAATGGATGTGATGCTTCTTTACTTTTGGATGACACACCAACTATGCTCGGGGAGAAATTAGCACTCTCGAATATAAATTCGCTTAGATCATTTGAGATTATTGATGAAGCTAAGGAGGCTCTGGAGAAGGATTGTCCAGGAGTTGTTTCTTGTGCAGATATCATAATCATGGCTTCTAGAGACGCTCTATTTCCATTGCAGACAGGAGGACCCAATTGGGAAGTGAATTTGGGAAGATTGGACAGCTTGACAGTTAGTCAAGAAGACTCAGATAATATCATGCCCAGCCCAAGATCTAATGCAAGCTATCTTATTGACCTCTTCCAAAAATTTAACCTCAGTGTCAAAGACCTTGTAGCACTCTCAGGATCTCACTCTATTGGCCAAGCTCGTTGTTTTTCCATCATGTTTAGACTATACAATCAATCTGGAACTGGAAAGCCTGACCCTGCCATTGACCCAAAGTATGGAGAAGAGCTTAACAAGCTATGTCCACTAGATGTTGATCAAAATGTGACAGGGGACCTTGATTCAACGCCTCTGCTGTTTGATAACCAATATTTCAAAGACTTGGTTGCTGGGAGGGGATTTCTTAACTCTGATCAAACACTTTACACTTCCCCCTTGACAAGAGAGCTAGTGAAGCTATATAGTACAAATCAAACTGAATTTTTCAACGCATTTGTGGAAGGGATGTTGAAAATGGGTGACTTACAATCTGGTCGGCCTGGGGAGGTTAGGAGGAATTGCAGAGTGGTTAATTCTGGTTTGGATCATTTGATGTCTGTGTCTCAAAGCAAAATGAAGGGTAAAGATGTATGTATCAATATAGATGATGTTTTATTTCTAGAATCCTAA 1053 0.415 MALGFFLVFLLHLVLAASSDIRPGFYSNSCPKAESIVRDVMKRALIREPRSVASVMRFQFHDCFVNGCDASLLLDDTPTMLGEKLALSNINSLRSFEIIDEAKEALEKDCPGVVSCADIIIMASRDALFPLQTGGPNWEVNLGRLDSLTVSQEDSDNIMPSPRSNASYLIDLFQKFNLSVKDLVALSGSHSIGQARCFSIMFRLYNQSGTGKPDPAIDPKYGEELNKLCPLDVDQNVTGDLDSTPLLFDNQYFKDLVAGRGFLNSDQTLYTSPLTRELVKLYSTNQTEFFNAFVEGMLKMGDLQSGRPGEVRRNCRVVNSGLDHLMSVSQSKMKGKDVCINIDDVLFLES. 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10017 350 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Seca4g10017 350 SUPERFAMILY Heme-dependent peroxidases 21 319 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca4g10017 350 Pfam Peroxidase 37 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g10017 350 PANTHER PEROXIDASE 72-RELATED 16 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g10017 350 Gene3D Peroxidase, domain 2 160 300 - -
Seca4g10017 350 ProSiteProfiles Plant heme peroxidase family profile. 20 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g10017 350 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g10017 350 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g10017 350 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g10017 350 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g10017 350 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g10017 350 CDD secretory_peroxidase 22 318 IPR033905 GO:0004601|GO:0042744
Seca4g10017 350 Gene3D - 24 319 - -
Seca4g10017 350 FunFam Peroxidase 160 300 - -
Seca4g10017 350 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g10017 350 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g10017 350 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g10017 350 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g10017 350 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g10017 350 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g10017 350 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g10017 350 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10017 Seca-Chr4 233148274 233151303 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10017 5 319 Peroxidase AT2G22420 73.333 3.61e-177 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10017 K00430 - gmx:100796737 525.783