Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10016 ATGTTTGACAACATACCCACCAACCAACACATGATGACCATGCCTCTCTTTCTGATCTTCATCCTCCTACACATAACCTTGGTGGCATCATCGGATCTCCGACCTGGGTTTTACTCAAATACATGTCCAGAAGCTGAACTCATAGTCCGAGATGTCATGAAGAAGGCCCTCATAAGGGAACCCAGAAGTGTTGCCTCTGTTATGCGCTTTCAGTTCCATGATTGCTTTGTTAATATTGAATTTGTGAAGGGGTGTGATGCTTCTATGTTGCTTGATGATACACCAACCATGCTTGGGGAAAAACTGGCCCTCTCAAATATAAATTCTCTTAGATCATTTGAAGTTATTGATGAAATCAAGGAAGCCCTCGAGAAGGCGTGCCCCGGAGTTGTTTCTTGTGCTGACATCATAATTATGGCAGCTAGAGATGCTGTAGCACTGACAGGAGGACCCAACTGGGAGGTGAGATTGGGAAGATTGGACAGCTTGACTGCTAGTCAAGAAGACTCAAACAATATCATGCCCAGCCCAAGAGCCAATGCAAGCTATCTTATTGACCTCTTCCAGAAATTTAACCTTAGTGTCAAAGACCTTGTAGCACTCTCAGGATCTCACTCTATTGGCCAAGCTCGTTGTTTTTCCATCATGTTTAGACTATACAATCAATCTGGAACTGGAAAGCCTGACCCTGCCTTTGAACCAAAGTATAGAGAAGAGCTTAACAAGCTATGTCCACTAGATGTTGATCAAAATGTGACAGGGAACCTTGATTCCACGCCTCTGCTGTTTGATAACCAGTATTTCAAAGACTTGGTTGCTGGGAGGGGATTTCTCAACTCTGATCAAACACTTTTCACTTTCCCCCAGACAAGGGGTTTAGTGAGGATATACAGTAAACATCAAAATAAGTTTTTCAAAGCATTTGTAGAAGGAGTGTTGAAAATGGGTGAGTTGCAATCTGGTCGGCCTGGGGAGGTTAGGAGGAACTGCAGGATGGTCAATGCTCGCGGAGCTCATTTGATGTCTGAGTCTCAACACAAGATGGAGGGTAACGGTATATCAATATAA 1068 0.4363 MFDNIPTNQHMMTMPLFLIFILLHITLVASSDLRPGFYSNTCPEAELIVRDVMKKALIREPRSVASVMRFQFHDCFVNIEFVKGCDASMLLDDTPTMLGEKLALSNINSLRSFEVIDEIKEALEKACPGVVSCADIIIMAARDAVALTGGPNWEVRLGRLDSLTASQEDSNNIMPSPRANASYLIDLFQKFNLSVKDLVALSGSHSIGQARCFSIMFRLYNQSGTGKPDPAFEPKYREELNKLCPLDVDQNVTGNLDSTPLLFDNQYFKDLVAGRGFLNSDQTLFTFPQTRGLVRIYSKHQNKFFKAFVEGVLKMGELQSGRPGEVRRNCRMVNARGAHLMSESQHKMEGNGISI. 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10016 355 Gene3D Peroxidase, domain 2 175 315 - -
Seca4g10016 355 CDD secretory_peroxidase 33 333 IPR033905 GO:0004601|GO:0042744
Seca4g10016 355 ProSitePatterns Peroxidases proximal heme-ligand signature. 197 207 IPR019793 -
Seca4g10016 355 Gene3D - 36 334 - -
Seca4g10016 355 ProSiteProfiles Plant heme peroxidase family profile. 32 334 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g10016 355 SUPERFAMILY Heme-dependent peroxidases 33 334 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca4g10016 355 Pfam Peroxidase 49 299 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g10016 355 FunFam Peroxidase 36 182 - -
Seca4g10016 355 PRINTS Haem peroxidase superfamily signature 131 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g10016 355 PRINTS Haem peroxidase superfamily signature 197 212 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g10016 355 PRINTS Haem peroxidase superfamily signature 149 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g10016 355 PRINTS Haem peroxidase superfamily signature 256 271 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g10016 355 PRINTS Haem peroxidase superfamily signature 64 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g10016 355 PANTHER PEROXIDASE 72-RELATED 27 333 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g10016 355 FunFam Peroxidase 175 315 - -
Seca4g10016 355 PRINTS Plant peroxidase signature 270 287 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g10016 355 PRINTS Plant peroxidase signature 130 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g10016 355 PRINTS Plant peroxidase signature 42 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g10016 355 PRINTS Plant peroxidase signature 66 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g10016 355 PRINTS Plant peroxidase signature 111 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g10016 355 PRINTS Plant peroxidase signature 149 164 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g10016 355 PRINTS Plant peroxidase signature 196 208 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g10016 355 PRINTS Plant peroxidase signature 254 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10016 Seca-Chr4 233130335 233133451 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10016 11 336 Peroxidase AT2G22420 72.699 0.0 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10016 K00430 - gmx:100796737 558.91