Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10001 ATGGCGGCGATAGAGGAGTTACCTTCTTCCATGCGCCAAGCTTCTGCTGAGGAAAAATTGATTCCGTCATCAGATGAAATGATAGAGAGGAGTTTGGGAAGGTTTGGATGGATGGAGTTTGTGCAATGCATCCTTGTGTCATTTGCAATGTTCTTTGATGCACAACAATCATTCATAAGTATCTACTCTGATGACTACCCAACATGGCACTGCAATGACTTCACCGCATGTAGCACAGCCACCTTGGCTGATACATCTCTTGGAAGAAAGAACATGCTCATTCTGTCTTGTTTATCTATGTCTATAACTTCAATACTCATAGTCTTCTCTACCAACGTTTGGATTTACTCGGCTTTTAAATTCGTGATTGGGTTTTTGCGTTCATCTATTGGAACATGTGTTCTGGTGTTACTAACTGAGAAAGTGAGCACAGAGTGGAGGTTCACTGTTGGGATTGTAGAATATTTCTGCTTCACATTGGGGTACATGTCCTTGCCTGGTATAGCTTATGTCAACAGAAATTCCTCATGGAAATCTCTTTATGTGTGGACATCAATTCCTGCTATTGCTTACTCAATCATTGCTTACATTTTTGTTACTGAGTCTCCAAGGTGGCTTCTCATGCAAGGTAGACAGCAAGAAGCAATAGCAATGCTTAAAGGAGTTTCTTCAGCAGAAAATGGTGTTGATTTGACTGGAAGCCTACTAAAAGTTACTACTCCTAAACAAAAGGCTTCAATTTTCCAACTATACTCATCAATAGCAGAGCTGTTTAGTAGAAGTTGGGCTCTTAAACGAATGGTAGCCATTATGGTGCTTGGTATTGGCATTGGAATGGTGTATTTTGGCATGCCTTTAGCAGTGGGGAACTTGGGATTTGACATTTACTTGGCTGTTGTGTTCAATGCCTTGATGGAAATACCTTCTTGTGTGGCAACCTATTTCTTGGAAAACCGCAGAAGAAGGCCATCTATTCTTGTGTTCTCCTTAGCAAGTGGCATATGCTGTGTAATGTGTGTTGTTGTGGGCCGCGGGCTACAAGGAGTTAAGGTGAGTCTATCATTGATATCATTCTTCAGTGCTTGCACAGCTTATAATGTGTTTCTCATATACATTATAGAGCTGTTTCCTACAAGTGTGAGGAACACTACAACTTCACTGGTGAGGCAAGCCATTGTATTTGGTAACATATTCAGCCCATTTTTGATATCTGCGGGGAGGAAAAATGACTTCTTCTCTTATGGGGTGTTTGGAATAGTTATAATGTGCTCCTGTATTACATTGATCGGTTTGCCAGAGACCAAAGGAATAGCTCTTTGTGATACCATGGATCAACAAGAGAAAAAAGACAACACATCTGTGTAA 1365 0.4081 MAAIEELPSSMRQASAEEKLIPSSDEMIERSLGRFGWMEFVQCILVSFAMFFDAQQSFISIYSDDYPTWHCNDFTACSTATLADTSLGRKNMLILSCLSMSITSILIVFSTNVWIYSAFKFVIGFLRSSIGTCVLVLLTEKVSTEWRFTVGIVEYFCFTLGYMSLPGIAYVNRNSSWKSLYVWTSIPAIAYSIIAYIFVTESPRWLLMQGRQQEAIAMLKGVSSAENGVDLTGSLLKVTTPKQKASIFQLYSSIAELFSRSWALKRMVAIMVLGIGIGMVYFGMPLAVGNLGFDIYLAVVFNALMEIPSCVATYFLENRRRRPSILVFSLASGICCVMCVVVGRGLQGVKVSLSLISFFSACTAYNVFLIYIIELFPTSVRNTTTSLVRQAIVFGNIFSPFLISAGRKNDFFSYGVFGIVIMCSCITLIGLPETKGIALCDTMDQQEKKDNTSV. 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10001 454 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 38 444 - -
Seca4g10001 454 SUPERFAMILY MFS general substrate transporter 29 439 IPR036259 -
Seca4g10001 454 Pfam Sugar (and other) transporter 82 439 IPR005828 GO:0016020|GO:0022857|GO:0055085
Seca4g10001 454 Gene3D MFS general substrate transporter like domains 38 444 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10001 Seca-Chr4 233003075 233005506 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10001 15 449 Organic Solute Cotransporters AT1G16390 43.662 1.89e-145 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10001 - - mtr:11431357 720.309